Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04544 ATGACTTCATCACCATTACTGTTCACAGTGCGGAGGCGCCCACCAGTGTTGGTGCCACCGGCTGCTTCCACTCCTTCTGAAGTTAAACTACTATCCGATATAGATGATCAAGAAGGCCTCCGTTTCAATATTCCTTTCATATTTATCTATCGTCATGAACCATCAATGATAGAAGATCCTGTTAAAGTTCTTAGACATGCACTCTCACACACACTTGTTTATTACTATCCATTTGCAGGAAGAATTAGGGAGGGTGTCGGGCGCAAGTTGATGGTGGATTGTACCGGTGAAGGTGTCATGTTCGTTGAAGCTGAAGCTGATGTAACACTTGATGAATTTGGTGACTCTCTACAACCTCCATTCCCTTGCTTCCAAGAACTTCTAAATGATGTTGCAGACTCTGAATTAATTATTGACCGTCCCATTCGACTCATACAGGTCACACGTCTGAAGTGCGGTGGCTTCATACTAGTCTTGCATTTGAACCATATAATGAGCGATGGAGCAGGTTTGAAACAATTCATGAATGCCTGGACAGAAATGGCTCGAGGAGCACATCAACCTTCCATTCAACCTGTGTGGCATAGAGATCTTTTAATGGCAAGAGACCCTCCACGCATTACATGCAACCATCGTGAATACGAACAAATACTTATGCCAAATACCATCAAGGAAGAAAATACTAACACCATAGTCCATCAATCTTTCTTCTTTAGATCTTCTGATATAGCTTCACTTCGTCGTTTGGTTCCACGTCAATGTACTACGTTTGATGTGATCACTGCATGTTTTTGGTGTTGCCGGACAAAAGCATTGCAATTACATCCAGATGAAGAGGTGCGAATGATGTGCATCGTTAATGCACGCCCGAGGTTTAGTGATAAGCATTCGCTTGTCGGGTATTATGGTAATTGTTTTGCTTATCCAGCGACCATCACCACTGCAGGGAAGCTTTGTGAAAAAGGACTTGGTTATGCAGTGGAATTGATACGAAAAGTAAAAGTCGAAGTTACAGAGGAATACATGCATTCTGTGGCAGATCTTATGGTTATTAAGGAACGATGTTTATTTACAACTATAGGGTCTTGTATTATTTCTGATTTGACTCGTGCTAAGTTCAGAGAAGTGAATTTTGGATGGGGTGAGGCAGTGTATGGTGGAGTTGGAAAAGGTGGGGCTGGGCCTTTTCCTGGTGCAACCTATATTGTTCCACATAAGAATGCAAATGGAGAAGAAGGTTTGATATTACCAATTAGTTTGTCCTCTCAAGATATGAAGAGGTTTGCTAAAGAGTTAGATGAGATGCTCGGTAGATAA 1317 0.4191 MTSSPLLFTVRRRPPVLVPPAASTPSEVKLLSDIDDQEGLRFNIPFIFIYRHEPSMIEDPVKVLRHALSHTLVYYYPFAGRIREGVGRKLMVDCTGEGVMFVEAEADVTLDEFGDSLQPPFPCFQELLNDVADSELIIDRPIRLIQVTRLKCGGFILVLHLNHIMSDGAGLKQFMNAWTEMARGAHQPSIQPVWHRDLLMARDPPRITCNHREYEQILMPNTIKEENTNTIVHQSFFFRSSDIASLRRLVPRQCTTFDVITACFWCCRTKALQLHPDEEVRMMCIVNARPRFSDKHSLVGYYGNCFAYPATITTAGKLCEKGLGYAVELIRKVKVEVTEEYMHSVADLMVIKERCLFTTIGSCIISDLTRAKFREVNFGWGEAVYGGVGKGGAGPFPGATYIVPHKNANGEEGLILPISLSSQDMKRFAKELDEMLGR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04544 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 435 - -
Tsu07g04544 438 Pfam Transferase family 17 434 - -
Tsu07g04544 438 Gene3D - 214 432 IPR023213 -
Tsu07g04544 438 Gene3D - 7 213 IPR023213 -
Tsu07g04544 438 PANTHER ALCOHOL ACYLTRANSFERASE 8 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04544 Tsu-Chr7 50296052 50299761 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04544 13 435 Monolignol Biosynthesis Gene Families AT5G48930 29.638 3.22e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04544 K19861 - mtr:MTR_7g114490 675.626