Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04542 ATGACTTCATCACCAATGTTCAACTTCAGAGTGCAGAAGTGCCAACCAGAATTGGTGCCACCAGCTGCACCTACTCCTCATGAAATAAAACTACTATCTGACATAGATAATCAAGAATGTTTGCGTTTTAATTTTCCTATGATATTTATCTATCATCATCAACCATCAATGGTAGAAAAAGATCCTATTAAAGTGCTTAGAAATGCACTCTCACAAACACTTGTTTATTACTATCCATTTGCAGGAAGGATTAGGGAGGGTGTTGGACGGAAGTTGATGGTGGATTGTACCGGCGAAGGTGTCATGTTCATTGAAGCTGAAGCTGATGTAACACTTGATCAATTTGGTGACTCTTTGCATCCTCCATTCCCTTGGTTCCAACAACTCTTAGATGATGTTCATGGAAACCAACAAATTATTGATCAACCCATTTTACTTATACAGGTGACACGTCTCAAGTGTGGTGGTTTCATATTGGCCTTGAGTATAAACCATACAATTAGTGATGCAACTGGTTTGAAACAATTCATGAATGCTTGGGCAGAAATCGCTCAAGGAGCAAATCAACCTTCGATTCAACCTATATGGCGTAGAGAGATCCTAATGGCAAGAGACCCGCCACACATTACATGCAACCATCGCGAATACGAACCAATTATACTTCCTCCAAATACCATCAAGAAAGAAGATACTACTACCATAGTCCatcaatcttttttatttacacCTGCTCATGTAGCTGCAATTCGTTGTTTGGTTCCACTTCATCTTCGTCAATGCACTGCATTCGATCTTATCACTGCATGCTTTTGGTGTTGTCGCACAAAAGCATTGCAGTTAGAGCCAGAGGAAGAAGTACGAATGATATGCGCTGTGAATGCACGTTCAAGGTTGAGTGCTAACCATTTGCTTGTTGGATATTATGGTAATTGTTCTGCTTTCCCAGCTGCTGTTACTAGTGCTGGAAAGTTAATTCGTGGAAACTCGTTAGGTTATGCAGTGGAATTgataaaaaaagcaaaagcccAAGTTACCGAAGAATACATGCATTCTTTGGCGGATCTTACGGTTATTAAAGAAAGATGTATATATAACACCATAAGGTCTTGTCTTGTATCAGACATGTCCCGTGCTAAGTACAAAAATGTGAATTTCGGATGGGGTGAGGCTTTGTATGGCGGAGTGGTAAAAGGCGGGGCTGGACCGTTACCTGGAGCAACGTATATAGTTCCGCATAAGAATGCGAAAGAAGAAGGTTTAATATTATTAACTCTCTTGCCCTTTGAAGTTATGAAAAGGTTGGCTGAAGAGTTAGATAAGATGTTCAGTAACCAAAATCAACCTATAACGAGTGGTCCTAGTTTTGTGATGTCTTCTTTATAG 1383 0.3912 MTSSPMFNFRVQKCQPELVPPAAPTPHEIKLLSDIDNQECLRFNFPMIFIYHHQPSMVEKDPIKVLRNALSQTLVYYYPFAGRIREGVGRKLMVDCTGEGVMFIEAEADVTLDQFGDSLHPPFPWFQQLLDDVHGNQQIIDQPILLIQVTRLKCGGFILALSINHTISDATGLKQFMNAWAEIAQGANQPSIQPIWRREILMARDPPHITCNHREYEPIILPPNTIKKEDTTTIVHQSFLFTPAHVAAIRCLVPLHLRQCTAFDLITACFWCCRTKALQLEPEEEVRMICAVNARSRLSANHLLVGYYGNCSAFPAAVTSAGKLIRGNSLGYAVELIKKAKAQVTEEYMHSLADLTVIKERCIYNTIRSCLVSDMSRAKYKNVNFGWGEALYGGVVKGGAGPLPGATYIVPHKNAKEEGLILLTLLPFEVMKRLAEELDKMFSNQNQPITSGPSFVMSSL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04542 460 Gene3D - 222 438 IPR023213 -
Tsu07g04542 460 Pfam Transferase family 10 439 - -
Tsu07g04542 460 Gene3D - 8 218 IPR023213 -
Tsu07g04542 460 PANTHER ALCOHOL ACYLTRANSFERASE 9 444 - -
Tsu07g04542 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04542 Tsu-Chr7 50285435 50289287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04542 18 411 Monolignol Biosynthesis Gene Families AT5G48930 28.780 1.54e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04542 K19861 - mtr:MTR_7g114490 653.284