Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04540 ATGACAGAGAAAAATCTTATTAAAGTTCTTAGATATGCACTCTCACAAACACTTGTTTACTACTATCCAATAGCGGGAAGGATTAGGGAGGGAGCTGGGGGCAAGTTGATGGTGGATTGTACTGGTGAAGGTGTCATGTTCGTTGAAGCTGAAGCTGATGTAACACTTGATCAATTTGGTGACTCTTTGCAACCTCCATTCCCTTGTTTTCAAGAACTTCTATACGATGTTGAAGGCTCTGAACAAATGATTGACCGTCCCTTTCGACTCATACAGGTCACACGTCTCAAATGTGGCGGTTTCATATTGGACTTGAGTTTAAACCATACATTTGGCGATGGAGCAGGTTTGAAACAATTTATGAATGCACGGACAGAAATGGCTCGAGGAGCAAATAAACCTTCCATTCAACCTGTGTGGCATAGAGAGGTCCTAATGGCAAGAGACCCGCCACGCATTACATGCAACCACCGTGAATACGAACAAATTATACTTCCTCCAAATACCATCAAGGAAGAAGATACTACTACCACAATACATCAATCTTTTTTCTTTACACCTGCTGACGTAGCTGCAATTCGTTGCTTGGTTCCACTTCATCTTCGCCAATGCACTGCATTCGATCTTATCACTGCATGCTATTGGTATTGTCGCACAAGAGCATTGCAGTTAAAGCCAGAGGAAGAGGTACGAATGATGTGTGTCGTTAATGCACGTTCGAGGTTTACTGACCGCCATTCACTTGTTGGATATTATGGTAACTGTATTGCTTTCCCTGCGGCTGTCACCACCGCAGGGAAGCTTTGTGGAAACCCATTAGGTTATGCAGTAGAGTTGATAAGAAAAGCAAAAGCTCAAGTGACAGAGGAATACATGCATTCTGTTGCAGATCTTATGGTTATTAAGGAAAGATGTTCATTTACAGACTTAAGGTCTTCTATTGTGTCAGATTGGACTCGTGCTAAGTTTGCAGAAGTTGATTTTGGATGGGGTGAACCAGTGTATGGTGGAGCGGCAAAGGGTGGAATTGGATCTTATTCTGGAGGAACCTATATTGTCCCACATAAGAATGCAAAAGGAGAAGAAGGTCTGATATTACCAATTTGCTTGCCGGCCATCTGA 1122 0.4269 MTEKNLIKVLRYALSQTLVYYYPIAGRIREGAGGKLMVDCTGEGVMFVEAEADVTLDQFGDSLQPPFPCFQELLYDVEGSEQMIDRPFRLIQVTRLKCGGFILDLSLNHTFGDGAGLKQFMNARTEMARGANKPSIQPVWHREVLMARDPPRITCNHREYEQIILPPNTIKEEDTTTTIHQSFFFTPADVAAIRCLVPLHLRQCTAFDLITACYWYCRTRALQLKPEEEVRMMCVVNARSRFTDRHSLVGYYGNCIAFPAAVTTAGKLCGNPLGYAVELIRKAKAQVTEEYMHSVADLMVIKERCSFTDLRSSIVSDWTRAKFAEVDFGWGEPVYGGAAKGGIGSYSGGTYIVPHKNAKGEEGLILPICLPAI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04540 373 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 372 - -
Tsu07g04540 373 Gene3D - 1 161 IPR023213 -
Tsu07g04540 373 PANTHER ALCOHOL ACYLTRANSFERASE 5 372 - -
Tsu07g04540 373 Pfam Transferase family 2 372 - -
Tsu07g04540 373 Gene3D - 162 372 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04540 Tsu-Chr7 50255642 50257007 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04540 8 361 Monolignol Biosynthesis Gene Families AT5G48930 29.539 3.56e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04540 K19861 - mtr:MTR_7g114490 565.844