Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04538 ATGGCTTCATCTCCATTGATTTTCACAGTCCGGAGGTCCCAACCAGAGTTGGTGCGTCCAGCTACACCCACTCCTCGTGAAGTTAAACTACTATCCGACATAGATGATCAAAAGGGCCTCCGTTTCAATATTCCTCTCATAGTTGTCTTTCGTCACGAACCATCAATGGCACAGAAAGATCCTATTAAAGTTCTTAGACATGCACTCTCTCAAACACTTGTTTACTACTATCCATTAGCGGGAAGGATTAAGGAGGGAGCTGGGGGCAAGTTGATGGTGGATTGTACTGGCGAAGGTGTCAAGTTCGTTGAAGCTGAAGCAGATGTAACACTTGATCAATTTGGCGACTCTCTGCAACCTCCCTTCCCTTGTTATCAAGAACTTCTAAACGATGTTGAAGGCTCTGAACAAATTATTGACCGTCCTATTCGACTCATACAGGTGACACGTTTCAAGTGTGGTGGTTTCATGTTGTCCATAAGTTGGAACCATACAATTGGTGATGGAGCTGGTTTGAAACAATTCATGAATGCTTGGGCAGAAATGGCTCGAGGAGCAAATCAACCTTCTATTCAACCTATATGGCGTAGAGAGATCCTAATGGCAAGAGACCCGCCACACATTACATGCAACCATCGCGAATACGAACCAATTATACTTCCTCCAAATACCATCAAGGAAGAAGATACTACTACCATAGTCCATCAATCTTTTTTCTTTACACCTGCTCACATAGCTGCAATTCGTTGCTTGGTTCCACTTCATCTCCGTCAATGCACTACATTTGATCTTATCACCGCATGCTTTTGGTGTTGCCGAACAAAAGCATTACAGTTAGAGCCAGATGAAGAGGTGCGAATGATGTGCATCGTAAATGCACGTTCGAGGTTTACTCTTAACCAATCATCACTTGTTGGATATTATGGTAACTTCTTTGCTTTTCCGGCGGCTGTCACAACCGCAGGGAAGCTTTGTGGAAACCCACTAGGTTATGCAGTAGAGTTGATAAGAAAAGCAAAAGCTCAAGTTACTGAGGAATACATGCATTCTGTGGCAGATCTTATGGTTCTTAAGGAACGATGTTTATTTACAACTATAGGTTCTTGTGTTATTTCTGATCTGACTCGTGCTAAATTCAGAGAAGTGAATTTTGGATGGGGCGAGGCAGTGTATGGTGGAGTTGGAAAAGGTGGGGCTGGGCCTTTTCCTGGTGCAACCTATCTTGTCCCACATAAGAATGTAAATGGGGAAGAAGGTTTCATATTGCCAATTTGTTTGTCCTATGAAGATATGAAGAGGTTTGCTAAAGAGTTAGATGAGATGCTTGGTAGCCAAAATCATCCTACAATGAGTGCGTCTAGTTTTGTCATGTCTAATTTGTAA 1383 0.4266 MASSPLIFTVRRSQPELVRPATPTPREVKLLSDIDDQKGLRFNIPLIVVFRHEPSMAQKDPIKVLRHALSQTLVYYYPLAGRIKEGAGGKLMVDCTGEGVKFVEAEADVTLDQFGDSLQPPFPCYQELLNDVEGSEQIIDRPIRLIQVTRFKCGGFMLSISWNHTIGDGAGLKQFMNAWAEMARGANQPSIQPIWRREILMARDPPHITCNHREYEPIILPPNTIKEEDTTTIVHQSFFFTPAHIAAIRCLVPLHLRQCTTFDLITACFWCCRTKALQLEPDEEVRMMCIVNARSRFTLNQSSLVGYYGNFFAFPAAVTTAGKLCGNPLGYAVELIRKAKAQVTEEYMHSVADLMVLKERCLFTTIGSCVISDLTRAKFREVNFGWGEAVYGGVGKGGAGPFPGATYLVPHKNVNGEEGFILPICLSYEDMKRFAKELDEMLGSQNHPTMSASSFVMSNL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04538 460 Pfam Transferase family 13 440 - -
Tsu07g04538 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 444 - -
Tsu07g04538 460 Gene3D - 221 438 IPR023213 -
Tsu07g04538 460 Gene3D - 8 217 IPR023213 -
Tsu07g04538 460 PANTHER ALCOHOL ACYLTRANSFERASE 8 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04538 Tsu-Chr7 50249185 50251301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04538 17 441 Monolignol Biosynthesis Gene Families AT5G48930 31.519 1.31e-54 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04538 K19861 - mtr:MTR_7g114490 698.353