Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04525 ATGATTGAGAAAACTACAGTAAGTTTTGATTTCATCTTACTCATGGAGTGCAACAAGGATGAGGCTCTGAGGGCGAAACAAATTGCTGAAAATAGAATGCAAAGTGGCGACTTTGTAGGGGCACTGAAGTTTGCTACTAAAGCTCAACGACTGTTTCCTGAGATCCAGAACATTACTCAGATCCTTACTGTCTGCGAGGTTCACTGTGCTGCACAGAACAAACTCTCTACATCTGATATGGACTGGTATGGAATTCTTCTGACTGATAAATTTACTGAAGAAGCAACAATAAAGAAACAGTATAAAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAGATCAGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGTGGAAGCTAACAGGGTATTGAGTGACCCAACAAAGCGTTCTTTATATAATGCGAAGATTAGCCGCCTTGTTGGAATTACAGCATCACAGGTTCCATCCCATCACACAGATGGGAGTTATTTTGGGGTGAAAGTTGATGAAAATGCTAGAAATTACCACAATAATTCAAATCAGCAGGATGAACGGCCTACATTTTGGACAGCATGCCAACACTGTAATACTAAGTACCAGTACTACAAAGCCATTGTAAATGCCACCTTGCATTGTCAACAATGTTTCAAACCCTTTAAAGCTCGTGATATAGGGTTCTATGCACCAACAGGACATACATCACCATCATTTAACAGTCATAAATATCCTCCAAACCATGTGCCGCCAAAAGAAACATCGAAAAGTAATGGCAGAAAACCTTATGGTAAAGGACCGGAAGAAAAATTTGAGCCTTCTTGTCCTGTATCTATGGCAAAATGTAGTGCTGGAAATGGTTCCTCTTGTAAAGTTCAAAAGAGTAAAGATGGCCATGGGGCTGCAGGAGTGACAAAAGCTGGTGCTGGAACATCCAATGGGGCTACATCCAAAGCCAAGCAATCgcaaatcccaacaaatgttgGAAGTAAGAGAGCAAGGCAGTCAGCATCAGCAGAGTTTGAGAGTGCTTCCAAAAGGCCACAACAAGATAAACCATTTAAGACCGTTAAAGTGGAGAAACAAGAAGTACCTGAACGTGGTGGGTTCAATAACACAAGGCCAGCTAGTTTCACTGCCGATGTGGTTGGTCAGAATGGAGATACAAAGTCCAAAGGCGAAAATTCTCAACTGAAATCGAATCTCCCTCCTGGTGATGTTATTAGCTGTCCTGATCCAGATTTCAGTAATTTTGACAAGATAAAGACAGAGGATTCTTTTGCTGATAATCAGTTCTGGGCTAtttatgatgatattgattGTATGCCAAGATTCTACGCTCACATCAAGAAGGTGCACTCCCCTTTCAAGCTGGAATATACTTGGCTGGAACCTAATCCGAACCACAAAGATGAGATTGATTGGTATAATGCAGGTTTGCCTGTTGCATGCGGTAAGTACAAACTCGGTCATTCTCAGAAAACTAAAGATTGTGGTATGTTCTCTCATCAGGTGCATTGCATAAAAGGAAGTGCTAGAGGTTCTTATCTGGTATATCCCATGAAAGGAGAAACTTGGGCAATTTTCAGACATTGGGATATAGGATGGAGTTCTAATCCAGAAAAAAATTCAgaatatcaatttgaatatgtGGAAGTCCTATCTGattttgatgagaaagatgGTGTTAAAGTTGCTTATCTCAGCAAAGTGAAAGGGTTTGTTAGTGTCTTTCAGAAAACTGTGCAGAATGGAATTCCCTTATTTTGCATTCCATCTAAGGAGTTGTATAGGTTTTCACACCGGGTTCCTTCATTTACAATGACTGGTAATGAAAGGAAAGACGTTCCGAGAGGATCATTTGAACTTGACCCTGCTGGCCTGCCTATGAGTGTTACTCAAGTTGAAGTTGGCGATCCTAGTGATGTGAAGATGAAGGATGGAAAGTTAAACAATGTAGTCAGTTCTCGCCAGGAATCCTCCAAGCGTAAAGTTGAACAGGCAAAGTCGAATGAGAGTATTCACAAAGCATTGAGGCGAGAGAGTAATGGTACTGAAAGAGTTCCACCAATCATTAGAAGATCGTCAAGGTCAAATGCGAAAAGTATGGACAATGGTCAAGCAAGCACTAATCAAAATATGGTCAGAGAGGATGACAAAAACAATAGCCAAAGGGACTACAGTCAACCGGAAGGAAGTGAAGCTGCTGCAATTCAGACCAATGAGAATTTCAAGACACCAAAGAAACCTGAGAAGAGAAATTATCATGAAGAGGCATCGACTGATAATCATTCTAACACTAGCAATAATATTAAGGAAACTGTGTTTTCTTCGTCTGCGGGAAATGATAGTGTgcgtttgaaaaaaaaatctggagTTGTGGAAGCATGTTATGACTTTAATAAGGAAAAATCTAGGGAGATGTTTCAGCGTGGTCAGATATGGGCAATATATGGTGATAGGGATGGTATGCCTGATGTTTATGTTCAAATCAAGAAGATTGAATCCACCAATAATTTTAGGCTGCACGTATCCGAACTTGAACCCTGCTCACCACCAAAAGGTTTGAAACAAACAATATCATGTGGCtccttcaaaattaaaaaagccAAACTCCAAATTCTTTCTCCCTCTGCATTCTCTCATCCACTAAAAATTGAACCCATGGAAAATAGTATATATGAAATTTACCCTAAAAAAGGTGAGATTTGGGCACTATACAAGGACCAGAACTATGAACTTACTTCTTCAAACCAGGGCAGAGGTGAATGTCATATAGTAGAAGTATTAGCAGATAGTGACAAGAGTATACAAGTTGTTGTTTTGGTGCGTCTTAACGGATCTCAGCCAATTTTCAAGGCTCCCATTATTCGGCGATCTAAGACCagtataattgaaatattaagaGAAGAGGTTGGTAGATTTTCACATCAGGTTCATACTATTCAGCCTAGTGAGGAAGATGATGTTCAACTCAAAGGGTGTTGGGTGGTCAATCCTTCCTCAATTCCTGGTTTTTCATACACTTAG 3030 0.3888 MIEKTTVSFDFILLMECNKDEALRAKQIAENRMQSGDFVGALKFATKAQRLFPEIQNITQILTVCEVHCAAQNKLSTSDMDWYGILLTDKFTEEATIKKQYKKLALLLHPDKNRSAGAEAAFKLIVEANRVLSDPTKRSLYNAKISRLVGITASQVPSHHTDGSYFGVKVDENARNYHNNSNQQDERPTFWTACQHCNTKYQYYKAIVNATLHCQQCFKPFKARDIGFYAPTGHTSPSFNSHKYPPNHVPPKETSKSNGRKPYGKGPEEKFEPSCPVSMAKCSAGNGSSCKVQKSKDGHGAAGVTKAGAGTSNGATSKAKQSQIPTNVGSKRARQSASAEFESASKRPQQDKPFKTVKVEKQEVPERGGFNNTRPASFTADVVGQNGDTKSKGENSQLKSNLPPGDVISCPDPDFSNFDKIKTEDSFADNQFWAIYDDIDCMPRFYAHIKKVHSPFKLEYTWLEPNPNHKDEIDWYNAGLPVACGKYKLGHSQKTKDCGMFSHQVHCIKGSARGSYLVYPMKGETWAIFRHWDIGWSSNPEKNSEYQFEYVEVLSDFDEKDGVKVAYLSKVKGFVSVFQKTVQNGIPLFCIPSKELYRFSHRVPSFTMTGNERKDVPRGSFELDPAGLPMSVTQVEVGDPSDVKMKDGKLNNVVSSRQESSKRKVEQAKSNESIHKALRRESNGTERVPPIIRRSSRSNAKSMDNGQASTNQNMVREDDKNNSQRDYSQPEGSEAAAIQTNENFKTPKKPEKRNYHEEASTDNHSNTSNNIKETVFSSSAGNDSVRLKKKSGVVEACYDFNKEKSREMFQRGQIWAIYGDRDGMPDVYVQIKKIESTNNFRLHVSELEPCSPPKGLKQTISCGSFKIKKAKLQILSPSAFSHPLKIEPMENSIYEIYPKKGEIWALYKDQNYELTSSNQGRGECHIVEVLADSDKSIQVVVLVRLNGSQPIFKAPIIRRSKTSIIEILREEVGRFSHQVHTIQPSEEDDVQLKGCWVVNPSSIPGFSYT 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 234 273 - -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 288 409 - -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 659 687 - -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 726 744 - -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 254 268 - -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 745 760 - -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 309 344 - -
Tsu07g04525 1009 SUPERFAMILY Chaperone J-domain 74 144 IPR036869 -
Tsu07g04525 1009 PRINTS DnaJ domain signature 101 116 IPR001623 -
Tsu07g04525 1009 PRINTS DnaJ domain signature 83 101 IPR001623 -
Tsu07g04525 1009 PRINTS DnaJ domain signature 117 137 IPR001623 -
Tsu07g04525 1009 SMART dnaj_3 80 137 IPR001623 -
Tsu07g04525 1009 ProSiteProfiles dnaJ domain profile. 81 145 IPR001623 -
Tsu07g04525 1009 PANTHER - 340 642 - -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 372 403 - -
Tsu07g04525 1009 Pfam Domain of unknown function (DUF3444) 797 983 IPR024593 -
Tsu07g04525 1009 Pfam Domain of unknown function (DUF3444) 408 612 IPR024593 -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 345 367 - -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 695 717 - -
Tsu07g04525 1009 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 340 642 - -
Tsu07g04525 1009 MobiDBLite consensus disorder prediction 653 770 - -
Tsu07g04525 1009 PANTHER - 684 1004 - -
Tsu07g04525 1009 PANTHER - 15 339 - -
Tsu07g04525 1009 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 684 1004 - -
Tsu07g04525 1009 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 15 339 - -
Tsu07g04525 1009 CDD DnaJ 81 134 IPR001623 -
Tsu07g04525 1009 Gene3D DnaJ domain 66 155 IPR036869 -
Tsu07g04525 1009 Pfam DnaJ domain 81 142 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04525 Tsu-Chr7 50150846 50155330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04525 18 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.953 8.01e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04525 - - mtr:MTR_7g114150 1410.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04525 07 50150846 50155330 Tsu07g04525 07 50150846 50155330 ECH
Tsu07g04525 07 50150846 50155330 Tsu01g03428 01 42330507 42331076 PCT