Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04498 ATGGCGATCAAAACCATTTCACTCTCACTACTCCTCACTCTcatcctcttcttctctttcacTATAACAAACTCTCCATCCTCTCCATCCCTCTCAATCCGCAGATCACTCCTCAACACAACAACTTCCTGCACCTCTCAATCCAACGGCATCCTCAACTACCACTGCATTTTCCCTCAAAACCCTTTCCTCTCAATCACATCTCTCTCCATTCTCCTCATCCTCCATTTCTACATCCTCATCAAAACCGCTTCTCACCATTTCTCAATCGTAACTACCAAACTCGCTTCTCACCTCAATCTCTCTCCTAGTATGGCCGCCGTCACACTTCTCGCTCTCGGTAACGGCTCTCCCGATGTTTTCTCATCTCTCGCCGCTCTTCGCGCCGGTCAATACCGTACTGGCTTCGGCGCTATACTCTCAGCTGGAGCTTTTGTTTCTGCTCTTGTTGTTGGCTTTGTAGCGATCTACGCCGCTCCTTTTCCAGTTGATCCGGCTCCGTTTGTTAGGGATGTGTTGTTTTATTTAACCGCTGCTATGTTTCTCTTTTACGTTTATCTTAGTGCTGAGATTTTTCTATGGCAAGCCGTTGGATTCGTTGCGTTCTATCTTTTTTTCGTTGGTTTTGTGTTTTATATGGATTTGGGAATTGTGAATCGTAGTGAGAAGAGTTCTGCGGATCTTGAGGGACAAGAGATGGAATCGTATTACGATGAAAAATCGCCGGGATCTGTTGGAAAAGATGATAAACACGCTTCTGGATTTACTGGATCTTTTCGTTTGATTTCTAAAGCATGGGAGCTTCCTGTCTCAACTCTCCTAAGATTGACAATCCCTCAACCAGCACCATCGCAATGGAGCAGATTTTATGCATCAGCCAATATTGCTCTTTGTCCTCTAGCCCTCTTGTATGCATGCAACTCATTCGTGCCACTTAATCATCCCATAGTTTTCCTCCTCCCCAATACTCTTTTCCCTCTTTGGTCCGTAGTGCTCATGACAAGCTTCTCTCTTGCGTTTCTTCATTTTGTAATGGAAAAAGAACCCCCAAAAGCAGAGCATTTGCCTGTGGTGGTCGTGGCATTTGTGATGAGTGTGTTTTGGATATCTACCATAGCCGGAGAGCTGGTGAATTGCCTCGAAGCCTTAGGTACGCTTCTCAAACTTCCAGCAGCATTCCTAGGTCTTACAGTGCTGGCATGGGGAAATTCAGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCGGCAATGGCAATGGCTGGATGCTTTGCTGGACCGATGTTTAACATGCTTATTGGTCTTGGAAGTGCTTTGGTCATACAAACGACAAATACATATCCTAAAGCCTATGAACTTAATTTCCATGTTGGTATAGTGATTGCATTTGTGTTCCTTCTTTTAAGCCTCATGGGGTCTCTCTTGGTAATCACTTGGTCCCGATTCCGAGTGCCTAGGTTTTGGGGATTCTGTCTCGTGGGCCTCTATATTGTTTTTATGGCAGTGAGTTCGGTCGTAGCCATCTTTTCAAGTTGA 1548 0.447 MAIKTISLSLLLTLILFFSFTITNSPSSPSLSIRRSLLNTTTSCTSQSNGILNYHCIFPQNPFLSITSLSILLILHFYILIKTASHHFSIVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGIVNRSEKSSADLEGQEMESYYDEKSPGSVGKDDKHASGFTGSFRLISKAWELPVSTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFVPLNHPIVFLLPNTLFPLWSVVLMTSFSLAFLHFVMEKEPPKAEHLPVVVVAFVMSVFWISTIAGELVNCLEALGTLLKLPAAFLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLIGLGSALVIQTTNTYPKAYELNFHVGIVIAFVFLLLSLMGSLLVITWSRFRVPRFWGFCLVGLYIVFMAVSSVVAIFSS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04498 515 Gene3D - 101 226 IPR044880 -
Tsu07g04498 515 Gene3D - 291 510 IPR044880 -
Tsu07g04498 515 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 41 225 - -
Tsu07g04498 515 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 259 514 - -
Tsu07g04498 515 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 41 225 - -
Tsu07g04498 515 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 259 514 - -
Tsu07g04498 515 Pfam Sodium/calcium exchanger protein 358 507 IPR004837 GO:0016021|GO:0055085
Tsu07g04498 515 Pfam Sodium/calcium exchanger protein 70 211 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04498 Tsu-Chr7 49917793 49923591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04498 11 515 Antiporters AT1G08960 68.113 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04498 K13754 - gmx:100775437 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04498 07 49917793 49923591 Tsu07g04498 07 49917793 49923591 ECH