Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04496 ATGGCCGTTCGGATTTATCCTGTGTCAACCAAACCAAATCACTGGGGCACCTGTATCAGTTGTTCATCGCTTGGTTGCATGCAATCCACTGGTCAACCTGCTGGAGCTCAGTTGGTTCAGCATCAACTTTCTTATCAGCATATTCAGCAGCAACTTCAGCAACAGCTGCAAGCCTTTTGGGCAAAGCAGTCCCAAGAAATTGAAAAGGTTACTGATTTCAAGAACCACAGCCTTCCCCTGGCAAGGATCAAGAAGATTATGAAGGCTGACGAGGATGTTAGAATGGTTCTCACTGTTTTCGGAACCAAGCTCTATCTTTGA 321 0.4579 MAVRIYPVSTKPNHWGTCISCSSLGCMQSTGQPAGAQLVQHQLSYQHIQQQLQQQLQAFWAKQSQEIEKVTDFKNHSLPLARIKKIMKADEDVRMVLTVFGTKLYL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04496 106 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 19 96 - -
Tsu07g04496 106 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Tsu07g04496 106 SUPERFAMILY Histone-fold 48 96 IPR009072 GO:0046982
Tsu07g04496 106 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 19 96 - -
Tsu07g04496 106 Gene3D Histone, subunit A 39 99 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04496 Tsu-Chr7 49904068 49907275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04496 36 96 CCAAT-HAP5 Transcription Factor Family AT1G08970 75.410 5.54e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04496 K08066 - zju:107412013 94.3597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04496 07 49904068 49907275 Tsu07g04496 07 49904068 49907275 ECH