Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04483 ATGGCTACTTACCATGTTGGTCTCCATGAAATTGGAATAATTTTCTTGCTCCAAATGATTACTATTTCTGTAAAGCCACTCTCATTCAATTACCAACAAGGCTTTAAATATGATGATGTAAAACTACAAGGAGGTGCTTCTTTGTTGTATTCATACATCCAGCTTACTTCAACCTCAAGGTACCAAAGTAATGCTTACAGTGTCGGGCGAGTGACATGTTTCGAGCCATTACAACTATGGGACAAGGCCTCAAGAAAACTCACTGATTTCACCACTCAATTTTCCTTTGTAATTTACTCAAATGAGACTGATTTTGGAGATGGATTGACATTTTTCTTTGCAGATCCAGAACTTCCACTTTACCATATAAAACAAGGAGGTGGTCTTGGCCTTGTGAATGATTACCAAATATTGAATTCTACTAGATATTCATTTCTAGCAGTGGAGTTTGACACTCACCAAAATTCTTGGGATCCACCAGGCACTCATGTAGGTATAAATTTCAACTCTATGTTATCAAATATAACTAAACCATGGTTCATTGATATTAGGAGTAAGAATATTTATGATTGTAAGATTGAGTACAATTCAAGTACTCATAATTTGAATGTTTCTTTCACTGGAAACATAACAAATGGTATGCCTTCAAAAAGTTACATCTCATACAATGTTGATTTGAGAGATTACCTACCTGAGAGGGTTATTATTGGTTTCTCAGCTGCTACAGGATATATGTTTGAGATGAATACATTAAATTCATGGTCATTCAATTCAAGTTTAAAAATTCATGATGAGAATCCTAGTCTAATCCCAAAAAATCCTAGTCCTTCACCAATTCCAAATAGTCCTAAAATAGATAGCAAAAAAGGTAGTATGTGGGTTGGGCTAGGAGTTGGTGTAGCTATTTCATCAAGTTTCCTTATTTTAGGAGGggtttgtattttaatttggaAAAGGACTAAAGGTACAAAAGAGGATTCAATTTTTGACCTGAAAATGGATGATGAATTCCAAAATGGCACTGGACCTAAAAAGTTTTGCTATAATAAATTGGTGAGTGCAACAAATAACTTTGCAGAAGAACAAAAGATTGGACAAGGTGGTTTTGGTGGTGTTTATAAAGGTTATTTGAAAGATATAGATACCAATGTTGCTATAAAGAGGATATCAAGAGAGTCTAGACAAGGGATTAAGGAATATGCAACTGAAGTTAAAATCATTAGCCAACTTAGGCATAGGAATTTAGTACAACTAATTGGTTGGTGTCACAAGAAAAAAGACTTTCTCCTTATATATGAATTCATGCAAAATGGTAGCTTAGATTCTCACCTTTATCGTGGAAAAAGCGTATTAACATGGCAAATGAGGTACAACATTGCCATGGACTTGGCTCTAGCACTTCTATACCTTCATGAAGAATGGGAACAATGTGTGCTTCATAGGGATGTGAAATCCAGCAACATTATGTTGGATGACAATTTCAATGCTAAGCTTGGTGATTTTGGATTGGCTAGGCTTGTGGATTATGAGAAAGGATCACAATCACAAACTACAGTTATAGCTGGGACCATGGGGTACATAGCTCCTGAATATTTCACAACAGGTAAGGCTACAAAGGAATCAGATATATACAGTTTTGGTATTGTTTCATTGGAATTAGCCAGTGGAAGAAAACCAGTTGATCTTAATGCTAAGGAGGATCAAATGGCCATATTTGATTGGGTTTGGGAGCTTTATAGATTGGGAAGGTTGCTTGAAGTAGTAGACACAAAACTTGAGGGTGTATTCGATGACGAACAAATGGAACGTTTATTGGTTATTGGTCTTTGGTGTTCCAATCCAAATTATTCATTTAGGCCATCTGTAAGACAAGTTATTCAGGTGCTTAAACTTGAAGCTCCTTTACCAATTCTCCCACCTCCAACAAAGAGTACAATTATTGGTCCTGTTTCTTCTGCCTCTCCACGGCTTACACTTCATAACATAACCAGCTAG 1995 0.3579 MATYHVGLHEIGIIFLLQMITISVKPLSFNYQQGFKYDDVKLQGGASLLYSYIQLTSTSRYQSNAYSVGRVTCFEPLQLWDKASRKLTDFTTQFSFVIYSNETDFGDGLTFFFADPELPLYHIKQGGGLGLVNDYQILNSTRYSFLAVEFDTHQNSWDPPGTHVGINFNSMLSNITKPWFIDIRSKNIYDCKIEYNSSTHNLNVSFTGNITNGMPSKSYISYNVDLRDYLPERVIIGFSAATGYMFEMNTLNSWSFNSSLKIHDENPSLIPKNPSPSPIPNSPKIDSKKGSMWVGLGVGVAISSSFLILGGVCILIWKRTKGTKEDSIFDLKMDDEFQNGTGPKKFCYNKLVSATNNFAEEQKIGQGGFGGVYKGYLKDIDTNVAIKRISRESRQGIKEYATEVKIISQLRHRNLVQLIGWCHKKKDFLLIYEFMQNGSLDSHLYRGKSVLTWQMRYNIAMDLALALLYLHEEWEQCVLHRDVKSSNIMLDDNFNAKLGDFGLARLVDYEKGSQSQTTVIAGTMGYIAPEYFTTGKATKESDIYSFGIVSLELASGRKPVDLNAKEDQMAIFDWVWELYRLGRLLEVVDTKLEGVFDDEQMERLLVIGLWCSNPNYSFRPSVRQVIQVLKLEAPLPILPPPTKSTIIGPVSSASPRLTLHNITS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04483 664 CDD lectin_legume_LecRK_Arcelin_ConA 27 260 IPR001220 GO:0030246
Tsu07g04483 664 SUPERFAMILY Protein kinase-like (PK-like) 342 645 IPR011009 -
Tsu07g04483 664 Pfam Legume lectin domain 27 265 IPR001220 GO:0030246
Tsu07g04483 664 ProSiteProfiles Protein kinase domain profile. 358 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04483 664 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Tsu07g04483 664 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
Tsu07g04483 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Tsu07g04483 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 276 IPR013320 -
Tsu07g04483 664 SMART serkin_6 358 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04483 664 Pfam Protein kinase domain 359 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04483 664 Gene3D Transferase(Phosphotransferase) domain 1 435 639 - -
Tsu07g04483 664 Gene3D - 25 270 - -
Tsu07g04483 664 PANTHER - 19 654 - -
Tsu07g04483 664 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Tsu07g04483 664 CDD STKc_IRAK 364 630 - -
Tsu07g04483 664 PANTHER LECTIN RECEPTOR KINASE 19 654 - -
Tsu07g04483 664 Gene3D Phosphorylase Kinase; domain 1 343 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04483 Tsu-Chr7 49825788 49827782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04483 13 639 Receptor kinase-like Gene Family AT5G10530 44.270 2.52e-170 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu07g04483 Pkinase 6.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04483 - - gmx:100814713 936.021