Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04482 ATGCAAGACATTTTCGGATCAGTTCGTCGGTCACTAGTCTTCCGTCCATCACCGGAAACCACCGAAGATCATTCACTCGGAGTCGGAGGAACAACAACCCTAGTTGATAAGATCGGTTACTGTATTCGTAATTCTAGAGTTTTCTCTAAACCTTCACCACCGTCTCCTCCGATTCCTAAAGAAACTGTTCCTCAAATCCGATGGCGAAAAGGCGAGTTAATCGGTTGTGGTGCTTTTGGTCAAGTTTATGTTGGAATGAATCTCGATTCTGGAGAGCTTCTTGCTGTTAAACAGgttTTGATTGCAGCAAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCACGTAAAAGAGCTTGAGGAAGAAGTTAAACTGCTTAAAGATCTTTCGCATCCCAACATTGTTAGATATTTGGGTACGGTTAGGGAAGAAGATACCTTAAATATTCTCCTTGAGTTTGTTCCTGGTGGATCCATATCTTCACTGTTGGGGAAGTTTGGAGCTTTTCCTGAGGCCGTCATAAGAACTTACACGAAGCAGATATTGCTTGGACTCGAGTACTTGCACAAAAATGGAATCATGCACAGAGACATTAAGGGGGCCAATATTCTTGTAGATAATAAAGGATGCATaaaagtagcagattttggaGCATCCAAACAAGTCGTTGAGCTGGCTACCATTTCTGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGGCATAGCTTCTCTGCTGACATATGGAGCGTGGGATGTACAGTGATTGAGATGGCCACGGGAAAGCCTCCTTGGAGCCAGCAATACCAACAAGAAGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCATCCACCAATTCCTGATCATCTCTCTGCTGGAGCAAAAGATTTTCTGCTAAAGTGCTTGCAGAAGGAACCAATTTTGAGGCTATCAGCATCGGAACTGCTGCAGCATCCCTTTGTTACTGGTGAAAATAGGGATTTGATTTCTCAGTCATCTACTGCCATGGCAAGTTTTAGAGCATCTTCACCGTCATGTGCTCCAAATGTTGAATCCTTACTTTGCTCAACGGAAAATCCTCTAGTCTCGGGAAATAATCATATATGGGGAATGAACAATGATGATGACATGTGTGAGATTGATGACAAAGAAGAGTTCTCAGAGTGTAATGTCAAATACAAATCATTGATGCCAGATAGTATTGAGAGTTTCAACCCAATGTCTGATCCCTCGGATGATTGGGGTTGTAAATTTGACGCAAGTCCAGTACTGGAAAATAGAGAAGTTAGTTTGGACACTGATGAAAATCACATGTCATGTGTTCAATTAGATTCTAATAAGGAACAGAAAGATTTATCCTTTCCATGTGTGCCATCTCTGTCAGAAGATGACGATGAGCTCACAGAGGTCAAAATTAAAGCTTTTTTGGATGAGAAGGCTCTTGAACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTTTTCAACAGTTTAAATGCATCTTGTTCTCCCAATGTGATTGATAGCCCAAGTGATGATACCCCCGGTCGAAAATACTTGAAATTACCTCCTAAAAGCAAGTCACCAAGTCGGATGCCAATTAGCTCTCCATCAAAAGCAGTTGACAATGCTGGAAGTCCTGGAAGTAATGGCAGGTCCTCAGTAACTGTTGGCAATGTAAATAGTCATGGTTCACAAGATGTTCCAGCATCTCCCATTAATGAACGGAAAGGAATGGTAGTTGACTCCCAGCAGGAGCCCTTTAGCCCAAGTTTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTCGAGAGAAAACGAGAAATGATGCGCCAAGCTAATATGGCAGGAAAGACATCTTCACCAAAGGATCGAGCTTTAAATCGACCGAGAGAAAGGACGAGATTTGCTTCTCCCAGCTAA 1971 0.4242 MQDIFGSVRRSLVFRPSPETTEDHSLGVGGTTTLVDKIGYCIRNSRVFSKPSPPSPPIPKETVPQIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQILLGLEYLHKNGIMHRDIKGANILVDNKGCIKVADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSAGAKDFLLKCLQKEPILRLSASELLQHPFVTGENRDLISQSSTAMASFRASSPSCAPNVESLLCSTENPLVSGNNHIWGMNNDDDMCEIDDKEEFSECNVKYKSLMPDSIESFNPMSDPSDDWGCKFDASPVLENREVSLDTDENHMSCVQLDSNKEQKDLSFPCVPSLSEDDDELTEVKIKAFLDEKALELKKLQTPLYEEFFNSLNASCSPNVIDSPSDDTPGRKYLKLPPKSKSPSRMPISSPSKAVDNAGSPGSNGRSSVTVGNVNSHGSQDVPASPINERKGMVVDSQQEPFSPSLSFSERQRKWKEELDQELERKREMMRQANMAGKTSSPKDRALNRPRERTRFASPS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04482 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Tsu07g04482 656 Gene3D Transferase(Phosphotransferase) domain 1 66 358 - -
Tsu07g04482 656 Coils Coil 608 632 - -
Tsu07g04482 656 SMART serkin_6 68 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04482 656 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 1 612 - -
Tsu07g04482 656 ProSiteProfiles Protein kinase domain profile. 68 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04482 656 CDD STKc_MAPKKK 67 331 - -
Tsu07g04482 656 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Tsu07g04482 656 Pfam Protein kinase domain 69 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04482 656 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 612 - -
Tsu07g04482 656 Coils Coil 101 128 - -
Tsu07g04482 656 MobiDBLite consensus disorder prediction 606 628 - -
Tsu07g04482 656 MobiDBLite consensus disorder prediction 539 579 - -
Tsu07g04482 656 MobiDBLite consensus disorder prediction 512 656 - -
Tsu07g04482 656 SUPERFAMILY Protein kinase-like (PK-like) 67 364 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04482 Tsu-Chr7 49818176 49823835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04482 1 655 MAP Kinase Kinase Kinase AT1G54960 56.080 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu07g04482 Pkinase 5.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04482 K20606 - gmx:100807537 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04482 07 49818176 49823835 Tsu07g04482 07 49818176 49823835 ECH