Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04465 ATGCAAATGAAGACAATTCCCTCAACCGGTTTTTTATCTTCCCTTCTAAAAGAAACACACAAAGGAGTGTTTAtctcatttcatttttattttctgtctcTCTCTGTCGGTACCATCATGAGACCACAAGGAAATCCATTAGATCTTAACAATTTGCCTGATGAATACTCTAGAGATCATGGTAAACAAGTTCTTGAAGACACCGATCCACCCGGTTGCATCAGGAAGAAGAAAAACGGCGGGAAGGATGGAAAAGAAGAGTGTGGGAAGGTCTATGAATGTAGATTTTGTTCCCTTAAGTTCTGTAAATCTCAGGCTCTTGGGGGACACATGAACCAGAGGGAAACAGAGACGCTTAACCATGCTCGTCAGCTAGTCTTCCGTAACGATCATAACCAGCTTGCACCACAACCACCTCCCTCCCACCTTGTAGGATGTTGTCCACCACCAATAGCAACAGGAGGCTACATTCAAGCAAATAGCATGGGAGATCCAACAATGCCTCTAAGATTTCCAAGATACTTCTCAGGCTCATCATCTTCAACTCATATTCCTCCTCCTCCACCTCCGCCACCAACACAACCAACTCAACCATATCTCTACACTTCACCTTCACGACCGGTGTCTTTTCCGACACATTTAATTCCTCAACATCCGATGAACGAATACCATGTCGGTCACGTGATGAGTAGCAGCCACCACCAGCAATATGGAGGACTCCAACACATGAACTACGTTGGAGgcggaggtggtggtggtggggaGTCAAATTATACGTGCATAGGTGCACCGGTCGGACAAGGTTTTGTTCCGGGAAGTGTTGGCACTGAGAAAggtcaaaatcatcatcatcatcaacatcaggATCAAGATGGTGGAAGTTTGAATTGGGGAAGGAGCAGCTATTCAGGAACACATACTCATAATTCATCGATCAATCGGTTTCAAGATGGTTTCTAA 960 0.4115 MQMKTIPSTGFLSSLLKETHKGVFISFHFYFLSLSVGTIMRPQGNPLDLNNLPDEYSRDHGKQVLEDTDPPGCIRKKKNGGKDGKEECGKVYECRFCSLKFCKSQALGGHMNQRETETLNHARQLVFRNDHNQLAPQPPPSHLVGCCPPPIATGGYIQANSMGDPTMPLRFPRYFSGSSSSTHIPPPPPPPPTQPTQPYLYTSPSRPVSFPTHLIPQHPMNEYHVGHVMSSSHHQQYGGLQHMNYVGGGGGGGGESNYTCIGAPVGQGFVPGSVGTEKGQNHHHHQHQDQDGGSLNWGRSSYSGTHTHNSSINRFQDGF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04465 319 MobiDBLite consensus disorder prediction 271 319 - -
Tsu07g04465 319 MobiDBLite consensus disorder prediction 172 199 - -
Tsu07g04465 319 MobiDBLite consensus disorder prediction 291 319 - -
Tsu07g04465 319 MobiDBLite consensus disorder prediction 61 81 - -
Tsu07g04465 319 PANTHER ZINC FINGER PROTEIN JAGGED 40 288 IPR031113 GO:0007275
Tsu07g04465 319 PANTHER ZINC FINGER PROTEIN JAGGED 40 288 IPR045320 GO:0003700
Tsu07g04465 319 MobiDBLite consensus disorder prediction 182 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04465 Tsu-Chr7 49658993 49665917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04465 43 268 C2H2 Transcription Factor Family AT1G13400 38.912 4.79e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04465 - - mtr:MTR_1g110710 431.409