Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04447 atgagtCGCGGTGGTGTTGCCGGAGCTAAGGGTAAGAAGAAGGGTGCAACCTTCACCATTGACTGTGCTAAGCCAGTTGAAGACAAGATCATGGACATTGCTTCTCTTGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGGCGGTAAAGCCGGTGCTCTCGGTGATTCTGTCACCGTTACCAGGGAGAAGTCTAAGATCACTGTTACCTCTGACAGTAACTTTTCCAAGagATATTTGAAGTATTTGACAAAGAAATACTTGAAGAAACACAATGTCAGAGACTGGCTTAGAGTGATTGCTTCAAACAAAGATAGGAGTGTCTATGAGTTGAGGTACTTCAACATCGCCGAGAACGAGGGAGAGGAAGAAGATTAA 375 0.4347 MSRGGVAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04447 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Tsu07g04447 124 Gene3D - 6 124 IPR038526 -
Tsu07g04447 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Tsu07g04447 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04447 Tsu-Chr7 49540902 49542847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04447 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 88.710 4.39e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04447 K02891 - jre:109012705 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04447 07 49540902 49542847 Tsu01g03522 01 43199049 43200739 PCT