Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04443 ATGGAAGGAGTTATGGATAAAGCGATATTGGATGATGTGATTAGAAGATTGTTAGAAGGAAAAGGTGGAAAACAGGTTCAGCTTTCTGAATCTGAGATTCGTCAACTTTGCATCAACGCTAGACAAATCTTCCTCTCTCAGCCAATTCTTCTTGAGCTTCGTGCTCCCATTCGCATTTGCgGTGATATACATGGTCAGTATCAAGACTTATTGAGGCTTTTTGAATATGGTGGCTACCCTCCAGCTGCAAATTACTTGTTTCTTGGTGATTATGTTGACAGAGGGAAGCAAAGTTTGGAGACAATATGCTTGCTTCTGGCCTACAAAATAAGATATCCGGACAGAGTTTATCTCTTAAGAGGAAACCATGAAGATGCAAAGATAAACCGAATATACGGTTTTTATGACGAATGTAAAAGGAGGTTCAATGTCAGGCTATGGAAGATATTCACCGATTGCTTTAACTGTTTGCCGGTAGCTGCACTTATCGATGACAAAATACTTTGTATGCATGGAGGACTCTCTCCAGAACTAGAAAATTTAAATCAGATAAGAGAGGTTACAAGGCCTACCGAAATTCCAGATAACGGTCTCTTGTGTGATCTGCTTTGGTCTGATCCTGATGCTAGTACTGAGGGTTGGGCAGATAGTGACCGAGGCGTTTCGTGTACTTTTGGACCTGATGTTGTTGCAgattttttggacaaaaatgatCTCGATCTTATTTGCAGGGGTCATCAGGTAAACCTCTTCGTTCAAATGAGTATATTGAACGAATCGGTACATGTTTTCCTTCATAATTGTCCTAAACCATCTAGCTACTTTTTACCTGGAAAATTTAGTAGAATTAGTTGCAAATATTATACTCATTTATCCATTTCAATTATTACCTGGAAAATTTAG 903 0.3821 MEGVMDKAILDDVIRRLLEGKGGKQVQLSESEIRQLCINARQIFLSQPILLELRAPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDRVYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPELENLNQIREVTRPTEIPDNGLLCDLLWSDPDASTEGWADSDRGVSCTFGPDVVADFLDKNDLDLICRGHQVNLFVQMSILNESVHVFLHNCPKPSSYFLPGKFSRISCKYYTHLSISIITWKI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04443 300 SMART pp2a_7 28 292 IPR006186 GO:0016787
Tsu07g04443 300 Pfam Serine-threonine protein phosphatase N-terminal domain 10 54 IPR031675 -
Tsu07g04443 300 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 248 - -
Tsu07g04443 300 SUPERFAMILY Metallo-dependent phosphatases 10 251 IPR029052 -
Tsu07g04443 300 Gene3D - 7 261 IPR029052 -
Tsu07g04443 300 PRINTS Serine/threonine phosphatase family signature 56 83 IPR006186 GO:0016787
Tsu07g04443 300 PRINTS Serine/threonine phosphatase family signature 152 178 IPR006186 GO:0016787
Tsu07g04443 300 PRINTS Serine/threonine phosphatase family signature 238 258 IPR006186 GO:0016787
Tsu07g04443 300 PRINTS Serine/threonine phosphatase family signature 118 142 IPR006186 GO:0016787
Tsu07g04443 300 PRINTS Serine/threonine phosphatase family signature 85 112 IPR006186 GO:0016787
Tsu07g04443 300 PRINTS Serine/threonine phosphatase family signature 181 208 IPR006186 GO:0016787
Tsu07g04443 300 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 248 - -
Tsu07g04443 300 Pfam Calcineurin-like phosphoesterase 57 247 IPR004843 GO:0016787
Tsu07g04443 300 ProSitePatterns Serine/threonine specific protein phosphatases signature. 119 124 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04443 Tsu-Chr7 49503381 49507075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04443 57 244 Calmodulin-binding Proteins AT5G63870 34.529 2.20e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04443 K06269 - gmx:100805030 491.886