Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04442 ATGAGCAAGGTCAACCGACCTCCAATTTCTTTATCAAGGGTGATTGAATTCTTGAAGGGGAAGGATGGTAAAATTGGTGTTGTTGTCGGTGCTGTAACTGATGATATCAGAGTATATGAAGTCCCAGCAATAAAAATTGCTGCCCTCAGGTTCACAGAGACTGCACGTGCAAGAATAGAGAAGGCTGGTGGTGAATGCTTAACATTTGATCAACTTGCTCTCAGGGCTCCCCTAGGACAGAACACAGTCCTTCTAAGAGGCCCAAAGAATTCTCGCGAAGCAGTGAAACACTTTGGTCGTGCTCCTGGTGTGCCACACAGCCATACCAAGCCTTATGTAAGAGCAAAGGGAAGGAAATTTGAGAAGGCTAGAGGAAAGAGGAACAGTAGgggatttagggtttga 405 0.4395 MSKVNRPPISLSRVIEFLKGKDGKIGVVVGAVTDDIRVYEVPAIKIAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGRAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04442 134 PANTHER 60S RIBOSOMAL PROTEIN L18 1 133 IPR000039 GO:0003735|GO:0005840|GO:0006412
Tsu07g04442 134 SUPERFAMILY Ribosomal proteins L15p and L18e 2 86 IPR036227 -
Tsu07g04442 134 Gene3D - 1 134 - -
Tsu07g04442 134 Pfam Ribosomal protein 60S L18 and 50S L18e 1 134 IPR021131 -
Tsu07g04442 134 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04442 Tsu-Chr7 49498386 49500342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04442 1 134 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 82.090 1.45e-81 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04442 K02883 - vvi:104881363 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04442 07 49498386 49500342 Tsu01g03525 01 43220857 43225229 PCT