Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04435 ATGGTAAAGGTTGAACAAGTTAACCTTCATCAGGAACATGGCTTGACCATAAGTACTACACTCTCTCTTGGAAACCCTTCTTTGGAATTGAGCTTGGGGAAAAGTCCTCTTCACGTTGCTCAACAGGCTACGTCAACTCATTATCACTTCAttcagcagcaacaacaacaacatcaacaaatgTTTTTGCTACATCAGTATCAACAACGGCGGCAACATCAACAAAGGTTTTTGCTGCATCAGTATCAACATCAGCAGCAACAAATGAAGCATCAAGCTGAAATGATGTTTCAAAGGGACACTAGCGGCATAAACCCAAATTTTGACCACACCACTAGCGACACACCAACAATGTCGTCTAACATGGACGGAAGTTCATTCCATTTGATAGGAGCTCCATTAATCTCTTCGGGTCAGAATTCACAACAGCACAAGAGAAAATATTCTACCAGGGGTAATGAGGGAAATCTGAAATGTGGTAGCAGTTCTAAAGGCAATTGCTCACAGAAGAGGAAACATAAAGTGACGAGATCGATTAAGGTGTCCGCAATCAGTGAGAACGATGCAGTTATCCCTCCTGATCCTGATTATACATGGAGGAAATATGAGCAAAGGCCGATCAAGGGCACTCCTCACCCTAGGGGATATTACAGGTGCAGCAACAAGAAAGGCTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGATCCTACTATGCTAATTGTTACCTATGAAGGTGATCATAACCACCCCAAGATACCTAAACAATCTGCAAATGCATGA 786 0.4148 MVKVEQVNLHQEHGLTISTTLSLGNPSLELSLGKSPLHVAQQATSTHYHFIQQQQQQHQQMFLLHQYQQRRQHQQRFLLHQYQHQQQQMKHQAEMMFQRDTSGINPNFDHTTSDTPTMSSNMDGSSFHLIGAPLISSGQNSQQHKRKYSTRGNEGNLKCGSSSKGNCSQKRKHKVTRSIKVSAISENDAVIPPDPDYTWRKYEQRPIKGTPHPRGYYRCSNKKGCPARKHVERCLEDPTMLIVTYEGDHNHPKIPKQSANA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04435 261 Pfam Plant zinc cluster domain 155 187 IPR018872 -
Tsu07g04435 261 SUPERFAMILY WRKY DNA-binding domain 191 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g04435 261 SMART WRKY_cls 193 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04435 261 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 72 260 - -
Tsu07g04435 261 MobiDBLite consensus disorder prediction 136 173 - -
Tsu07g04435 261 Pfam WRKY DNA -binding domain 196 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04435 261 ProSiteProfiles WRKY domain profile. 194 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04435 261 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 72 260 IPR044810 GO:0003700
Tsu07g04435 261 Gene3D WRKY domain 177 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04435 Tsu-Chr7 49454924 49455709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04435 94 258 WRKY Transcription Factor Family AT2G30590 57.143 1.68e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g04435 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04435 - - gmx:100170681 303.908