Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu07g04435 | ATGGTAAAGGTTGAACAAGTTAACCTTCATCAGGAACATGGCTTGACCATAAGTACTACACTCTCTCTTGGAAACCCTTCTTTGGAATTGAGCTTGGGGAAAAGTCCTCTTCACGTTGCTCAACAGGCTACGTCAACTCATTATCACTTCAttcagcagcaacaacaacaacatcaacaaatgTTTTTGCTACATCAGTATCAACAACGGCGGCAACATCAACAAAGGTTTTTGCTGCATCAGTATCAACATCAGCAGCAACAAATGAAGCATCAAGCTGAAATGATGTTTCAAAGGGACACTAGCGGCATAAACCCAAATTTTGACCACACCACTAGCGACACACCAACAATGTCGTCTAACATGGACGGAAGTTCATTCCATTTGATAGGAGCTCCATTAATCTCTTCGGGTCAGAATTCACAACAGCACAAGAGAAAATATTCTACCAGGGGTAATGAGGGAAATCTGAAATGTGGTAGCAGTTCTAAAGGCAATTGCTCACAGAAGAGGAAACATAAAGTGACGAGATCGATTAAGGTGTCCGCAATCAGTGAGAACGATGCAGTTATCCCTCCTGATCCTGATTATACATGGAGGAAATATGAGCAAAGGCCGATCAAGGGCACTCCTCACCCTAGGGGATATTACAGGTGCAGCAACAAGAAAGGCTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGATCCTACTATGCTAATTGTTACCTATGAAGGTGATCATAACCACCCCAAGATACCTAAACAATCTGCAAATGCATGA | 786 | 0.4148 | MVKVEQVNLHQEHGLTISTTLSLGNPSLELSLGKSPLHVAQQATSTHYHFIQQQQQQHQQMFLLHQYQQRRQHQQRFLLHQYQHQQQQMKHQAEMMFQRDTSGINPNFDHTTSDTPTMSSNMDGSSFHLIGAPLISSGQNSQQHKRKYSTRGNEGNLKCGSSSKGNCSQKRKHKVTRSIKVSAISENDAVIPPDPDYTWRKYEQRPIKGTPHPRGYYRCSNKKGCPARKHVERCLEDPTMLIVTYEGDHNHPKIPKQSANA | 261 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu07g04435 | 261 | Pfam | Plant zinc cluster domain | 155 | 187 | IPR018872 | - | |
Tsu07g04435 | 261 | SUPERFAMILY | WRKY DNA-binding domain | 191 | 253 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu07g04435 | 261 | SMART | WRKY_cls | 193 | 253 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu07g04435 | 261 | PANTHER | WRKY DNA-BINDING PROTEIN 21-RELATED | 72 | 260 | - | - | |
Tsu07g04435 | 261 | MobiDBLite | consensus disorder prediction | 136 | 173 | - | - | |
Tsu07g04435 | 261 | Pfam | WRKY DNA -binding domain | 196 | 252 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu07g04435 | 261 | ProSiteProfiles | WRKY domain profile. | 194 | 254 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu07g04435 | 261 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 72 | 260 | IPR044810 | GO:0003700 | |
Tsu07g04435 | 261 | Gene3D | WRKY domain | 177 | 255 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu07g04435 | Tsu-Chr7 | 49454924 | 49455709 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu07g04435 | 94 | 258 | WRKY Transcription Factor Family | AT2G30590 | 57.143 | 1.68e-62 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tsu07g04435 | WRKY | 1.3e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu07g04435 | - | - | gmx:100170681 | 303.908 |