Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04428 ATGGGGCATTTTTCTTCTATGTTCAATGGTTTAGCAAGATCATTTTCACtaaagaaaggaagaaattctGTCAGATGTGAAAGGAGAGAAGCTGTTGAAGAAATGGCTAAAGAAGCTAAGAAAAATGACTTGATTTTGTGTAGCTCTGGTACTGTTAATGTTGATGGTTCAAACAATTTTGCCTCAGTTTTCTCCAAAAGAGGCCAGAAAGGAACCAATCAAGATTGTTGCATAGTGTGGGAGGAATTTGGATGCCAAGAAGACATGATATTTTGTGGGATATTTGATGGACATGGTCCATGGGGTCACTTTGTAGCCAAAAGAGTAAGAGAGTCAATGCCAAGGTCTTTGCTATGTAATTGGCAAGAAACACTTGCTGCACAATCTTCATCACTTGATGATAATGTAAAAGATATTGATCAAGTTAAAGCAGCTGCagacaacaaacaacaaagatTCAATATATGGAAGCACTCTTACTTGAAAACTTGTGCTACCATCGATCAAGAACTTGAGCATTGTCGAAAGTTTGACTCATTTTACAGTGGAACAACTGCCCTCTCAATTGTTAGACAGGGTGAAACGATTATCATAGCAAATGTTGGCGATTCTCGTGCAGTATTAGCTACAACTTCAGACGATGGAAATTTAGTTGCAGTTCAACTAACGGTCGATTTCAAGCCAAATTTACCTCAAGAGGCAGAGAGAATAATTCAGTGTGAAGGGCGTGTGTTCTGTTTAGAAGATGAACCTGGGGTGCATAGGGTATGGTTACCAGATGTAGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGATTATTGTATTAAACAATATGGTCTTATTTCAGTTCCTGAGGTAACTCAAAGGAATATAAGCAGTAAAGATCAGTTTGTTGTGCTTGCTTCTGATGGGGTTTGGGATGTGATCTCCAATCAAGAAGCAGTAGATATTATATCATCAACACCAGATAAAGCAAAATCAGCTAAACGTTTGGTGCAATGTGCAGTGCATGCATGGAAACGCAAGAGGAGGGGTATTGCCATTGATGATATTTCAGCAGTTTGTCTCTTTTTTCACTCTTCTTCACTTTCCTCTGAGCAAGTTGGCCCAATTGACACAGTTAAATAG 1134 0.3818 MGHFSSMFNGLARSFSLKKGRNSVRCERREAVEEMAKEAKKNDLILCSSGTVNVDGSNNFASVFSKRGQKGTNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPRSLLCNWQETLAAQSSSLDDNVKDIDQVKAAADNKQQRFNIWKHSYLKTCATIDQELEHCRKFDSFYSGTTALSIVRQGETIIIANVGDSRAVLATTSDDGNLVAVQLTVDFKPNLPQEAERIIQCEGRVFCLEDEPGVHRVWLPDVESPGLAMSRAFGDYCIKQYGLISVPEVTQRNISSKDQFVVLASDGVWDVISNQEAVDIISSTPDKAKSAKRLVQCAVHAWKRKRRGIAIDDISAVCLFFHSSSLSSEQVGPIDTVK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04428 377 SUPERFAMILY PP2C-like 55 361 IPR036457 -
Tsu07g04428 377 SMART PP2C_4 51 358 IPR001932 -
Tsu07g04428 377 PANTHER ALPHABET, ISOFORM E-RELATED 1 368 - -
Tsu07g04428 377 ProSiteProfiles PPM-type phosphatase domain profile. 60 360 IPR001932 -
Tsu07g04428 377 CDD PP2Cc 59 360 IPR001932 -
Tsu07g04428 377 Pfam Protein phosphatase 2C 66 334 IPR001932 -
Tsu07g04428 377 Gene3D - 46 363 IPR036457 -
Tsu07g04428 377 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04428 Tsu-Chr7 49393276 49397153 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04428 1 361 PP2C-type Phosphatase Gene Family AT3G05640 73.003 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04428 - - gmx:100801309 630.172