Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04424 ATGAGTAAGCGTGAATTTTCAAGGATGAAGCCGTTATCAACAGTTCCTTTGGCTACTTTGATTGGCCGTGAGATTCGAAATGATAATGTTGAAAAACCTTTTGTTAAATATGGACAAGCTGGATTAGCAAAGAAAGGAGAAgattacttttttattaaaactgaTTGTCATAGGGTTCCCGGCGATCCGTCAACTGCTTTTTCCGTCTTTGCgATTTTTGACGGGCACAACGGTATATCAGCTGCTATTTATACAAAGGAAAACTTGCTTAATAATGTTTTGAGTGCAATGCCACAAGATATCAGCAGGGATGCATGGCTACAGGCGCTTCCTCGCGCTTTAGTTGTTGGTTTTGTGAAGACTGACACGGAGTTTCAGAAGAAGGGGGAAACTTCTGGGACGACGGCTACATTTGTTCTGGTTGATGGCTGGACTGTCACTGTTGCATCTGTCGGTGATTCCCGTTGCATATTAGATACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGACCATAGACTGGAAGAGAATGTAGAAGAGAGGGAGCGTGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTGAATATATTTGGGGGAAATGCGGTAGGGCCTCTTCGCTGCTGGCCTGGAGGATTGTGCCTATCTAGATCAATAGGAGACACGGATGTCGGAGAATATATTGTGCCAATACCACATGTTAAGCAAGTGAAACTTTCAAATGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGATGCTTTATCTAATGATACGGCTGCCATGTCGTGTCGGGGTCTACCTGCAGAGCTTGCTGCTAAGTTAGTGGTTAAGGAAGCTCTAAGGTCTAGAGGCCTGAAGGATGATACAACCTGTCTTGTTGTAGATATTATTCCTTCTGACCACTCTGTATTACCACCAACtccaagaaagaaacataaTATGCTAACCACGCTTCTCTTTGGAAAGAAATCTGAGAACTCTACAAACAAAGCTACTAGCAAGCTTTCCGCAGTTGGTGTTGTTGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTATAGAAAGGCTTGGTAAGGATTTTCCATTTGATAAGAACTCCGAGATTTTTCGCTGTGCGATTTGCCAAGTGGATCAACCCCCTGGCAATGGTTTATCAGTGAACTCTGGACCTTTCTTTTCTCCAGCTTCTAAGCCATGGGAAGGCCCATTTCTCTGCACAAATTGTCGGAAGAAAAAAGACGCCATGGAAGGAAAGAGGCCTAGCTCACCTACCGTTACAGCACAATAA 1293 0.43 MSKREFSRMKPLSTVPLATLIGREIRNDNVEKPFVKYGQAGLAKKGEDYFFIKTDCHRVPGDPSTAFSVFAIFDGHNGISAAIYTKENLLNNVLSAMPQDISRDAWLQALPRALVVGFVKTDTEFQKKGETSGTTATFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNIFGGNAVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSNDTAAMSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHSVLPPTPRKKHNMLTTLLFGKKSENSTNKATSKLSAVGVVEELFEEGSAMLIERLGKDFPFDKNSEIFRCAICQVDQPPGNGLSVNSGPFFSPASKPWEGPFLCTNCRKKKDAMEGKRPSSPTVTAQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04424 430 PANTHER ALPHABET, ISOFORM E-RELATED 2 428 - -
Tsu07g04424 430 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 428 - -
Tsu07g04424 430 Gene3D - 34 303 IPR036457 -
Tsu07g04424 430 ProSiteProfiles PPM-type phosphatase domain profile. 33 298 IPR001932 -
Tsu07g04424 430 SUPERFAMILY PP2C-like 39 298 IPR036457 -
Tsu07g04424 430 SMART PP2C_4 24 296 IPR001932 -
Tsu07g04424 430 CDD PP2Cc 44 298 IPR001932 -
Tsu07g04424 430 Pfam Protein phosphatase 2C 63 267 IPR001932 -
Tsu07g04424 430 SMART PP2C_SIG_2 51 298 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04424 Tsu-Chr7 49371140 49374349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04424 1 428 PP2C-type Phosphatase Gene Family AT1G09160 75.467 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04424 - - gmx:100807886 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04424 07 49371140 49374349 Tsu07g04424 07 49371140 49374349 ECH