Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04423 ATGTCAAACGACCAAGGTTTACCATTCTCTGTTGTTTCTGTCGTCGAAGATGTTAttcaacaagaacaagaacaagaacaacaacaattgctgctgcagcagcagcagcaacaacagcaacaacaacaacagcagcaacaacaaaagGGTGGCCGGTCCGGTGATTACAAATTTGTCTCCAGAAAAACCGAAGAAGCTTCTTTGTTAAGGTATGAAGCGGCAACCTGGTTGCGAAAAGCGGTTGGAGTTGTCGGAGGGAAGGACTTACCAGCTGAACCTTCTGAAGAAGACTTTAGGATGGGTTTGCGTAGCGGGATTATTCTCTGCAATGCTCTCAACAAAATTCAACCTGGAGCAGTGGCTAAGGTGGTTGGAGGCCCTTGTGATTCTGTTCTTGTTCCTGATGGAGCAGCATTATCTGCTTTTCAATACTTTGAAAATATAAGGAATTTTCTTGTAGCTGTAGAAGAAATGGGACTTCCTTCCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGAAtagtgaattgtgttttggcAATGAAATCCTTGGCTGAAGGGACACTTGGAGGAAGAAGTGGGTCAGGGTCATTCAAATTTGGTCAAAAGCCACCTACACCTGGGAAATCAATTTTGAGGAAAAACTCAGAACCATTCATGAACTCACTATGGAGTATGACATTAGGTGACAAAGATGTTGGTTACATGAGTGATAACTCTTCATACAATGATTCTGGAAACGATCGCCAAGAAGGGGGttcattttcttccttaaaTTCACTAGTTCGCCAATATTTGTCTAATAAGAGGCCAGAAGAAATTCCCATTGCAGTGGAGTCTCTACTTAACAAAGTCATGGAAGAGTTTGAGCGTCGCATGCAAATTCAACAAGAAACGTTTAAAACAACTCACGAAGATAAGCCATCCGCTGAACTGGAACAATCAATTTCAAAAGATGCTTCTGTTGATGAAGCGatggaagaaaatgaagatggaGAACAATTGCAAGACAAgatggaagaaaaagaagatgaagaacagtTGGAAGAcaagatggaagaaaatgaagatggaGAACAATTGCAAGAAAAACAAGAGGAATGCGATGATGAGAAATACAATAGTGATGCTGAAGAATCAGACAAACTGAATTTGAAGCAGCTAAGTATAGTCGAGGAACAAACTAGAAGTATCCAgGAAGTGAAACACATTGTACATCAAACGAAATCGGGAATGCAGTTTCTGAAAAGGGAATACCAAAAGGATATGATCAATCTAAGTAAGCACCTGCATAGTCTAGCTGCTGCTGCTCAAGGATATCATAAAGTTCTCGAAGAAAACCGCAAGTTATACAATCAAGTACAGGATCTTAAAGGAAACATTAGGGTGTACTGTCGAGTTCGACCATTCTTGGGAGCGAAATCAAGTCAAAATAGCGTTGTCAGCGGCGTGGAGGAAGGAAGTATGACACTAATGATACCTCCCAATTCCAAACTTGGTAAAGAAGGAAAGAAGACATTTAACTTCAATAAAGCTTTTGGTTCTACTTCAACACAAGCGGAAGTATTCTCGGATATGCAGCCTCTGGTCCGTTCTGTTCTTGATGGTTACAATGTTTGTATTTTTGCATATGGCCAAACAGGTTCAGGAAAAACATACACTATGGCAGGACCAGACAATCTTGATGACGACACCATAGGTGTGAACTACCGTGCATTGCAagatctcttctttctctcaaatCAGAGGAAAGACACCATTAACTATGTAATCTCAGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACCTACTAGCTCCAGAGGGTTCTAATAAAAGATTAGAAATCCGCAATAGTTCCAATAATGGCATCAACGTGCCAGATGCGAACCTTGTTCCAGTTTCAACCACTTCCGATGTCATAAATTTGATGAACTTGGGACATAAAAACCGTGCTGTTGGTTCTACTTCCATGAACGAACGTAGCAGTCGTTCTCACAGTTGCTTGACAGTTCATGTTCATGGAAAGAACTTGGTATCAGGAGGCATTATTCGAGGTAGTATGCATCTTGTTGACCTTGCAGGAAGTGAGAGGGCCGATAAAACCGAGGCCACGGGAGATAGACTTAAAGAGGCTCAACATATCAACAAGTCACTTTCTGCCTTAGGGGATGTAATCGCTTCCCTTGCGCAGAAGAATGCACATGTTCCATACCGGAACAGCAAACTTACTCAGCTACTTCAGGATGCACTTGGAGGGCAGGCCAAGACTCTCATGTTTGTTCATATTAGTCCGGAACCTGATGCTCTTGGAGAAACACTAAGTACACTCAAGTTTGCAGAACGCGTATCCACTGTTGAACTAGGAGCTGCAAAAGTAAATAAAGATAACTCAGAAGTGAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGGCAGCCTTAGCGAGGAAGGATGGAGAATCAGAACAGTTTCAACAACTTACCAATAATGGCAGTGTTACACCAAAGTTAAAATCGTATGCATCGTCACCTCCCATACAACAACGTAGCTCGACATCTTCTGGAGGCCGTAAGCAACCAAAGGATGATTCTAGTAGCGAAATGGGTGATAATAAGGGTGCACCAAAGCTGAAAAGAAGAAGCCTAGATCTTCATGACATGTATAGGGGTTCACCACCATGGCCGCATAACAACCAAGGAGTAAATGGAAAAGAGGATGATAAGGAATCAGTTTCAAGTAGGATGAACAGAAATGACAGCTTCACTAGTGATGATAGCTTAGTGGGACAGTGGGAAGCAGAAAGTAAATATTCTCCATTGTTAAGTCCAACTTCTCTTTCAGAAAATTCAAAGTTATGTTTGGATCCCTCGTATGAGATGACCGCTATGACCACAGATGATTCCGATGACCTTGAAATTGCAACCAGTGTCAGTGATTGTTCAGAATCAGACATGAGTTGGTTAATACAGGCACCTAAACCAACCTCACTTTCAAATGGATTAGGCTCTAAATTAAAGAAACCTACTAATCCTAGACCAACAAAGATCCCCGAAATCAGGAGTATGATCCCATCATTAATTCCTACTCCATCAAAAAAACAAGCAAGCCCAGTTACTCAAGCAAGAAAGCATCCAGGATCAACTGGTGCAAAAAAGAGGACAAAGTGA 3183 0.388 MSNDQGLPFSVVSVVEDVIQQEQEQEQQQLLLQQQQQQQQQQQQQQQQKGGRSGDYKFVSRKTEEASLLRYEAATWLRKAVGVVGGKDLPAEPSEEDFRMGLRSGIILCNALNKIQPGAVAKVVGGPCDSVLVPDGAALSAFQYFENIRNFLVAVEEMGLPSFEASDLEQGGKSSRIVNCVLAMKSLAEGTLGGRSGSGSFKFGQKPPTPGKSILRKNSEPFMNSLWSMTLGDKDVGYMSDNSSYNDSGNDRQEGGSFSSLNSLVRQYLSNKRPEEIPIAVESLLNKVMEEFERRMQIQQETFKTTHEDKPSAELEQSISKDASVDEAMEENEDGEQLQDKMEEKEDEEQLEDKMEENEDGEQLQEKQEECDDEKYNSDAEESDKLNLKQLSIVEEQTRSIQEVKHIVHQTKSGMQFLKREYQKDMINLSKHLHSLAAAAQGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGAKSSQNSVVSGVEEGSMTLMIPPNSKLGKEGKKTFNFNKAFGSTSTQAEVFSDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMAGPDNLDDDTIGVNYRALQDLFFLSNQRKDTINYVISVQMLEIYNEQVRDLLAPEGSNKRLEIRNSSNNGINVPDANLVPVSTTSDVINLMNLGHKNRAVGSTSMNERSSRSHSCLTVHVHGKNLVSGGIIRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAAKVNKDNSEVKELKEQIASLKAALARKDGESEQFQQLTNNGSVTPKLKSYASSPPIQQRSSTSSGGRKQPKDDSSSEMGDNKGAPKLKRRSLDLHDMYRGSPPWPHNNQGVNGKEDDKESVSSRMNRNDSFTSDDSLVGQWEAESKYSPLLSPTSLSENSKLCLDPSYEMTAMTTDDSDDLEIATSVSDCSESDMSWLIQAPKPTSLSNGLGSKLKKPTNPRPTKIPEIRSMIPSLIPTPSKKQASPVTQARKHPGSTGAKKRTK 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04423 1060 Gene3D - 60 191 IPR036872 -
Tsu07g04423 1060 Pfam Kinesin motor domain 469 790 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04423 1060 SUPERFAMILY Calponin-homology domain, CH-domain 71 189 IPR036872 -
Tsu07g04423 1060 SMART ch_5 69 187 IPR001715 GO:0005515
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 824 934 - -
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 30 53 - -
Tsu07g04423 1060 Gene3D Kinesin motor domain 404 793 IPR036961 -
Tsu07g04423 1060 PANTHER KINESIN-LIKE PROTEIN KIN-14H 53 1048 - -
Tsu07g04423 1060 Coils Coil 325 364 - -
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 30 56 - -
Tsu07g04423 1060 Pfam Calponin homology (CH) domain 70 186 IPR001715 GO:0005515
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 302 384 - -
Tsu07g04423 1060 Coils Coil 798 835 - -
Tsu07g04423 1060 Coils Coil 18 45 - -
Tsu07g04423 1060 ProSiteProfiles Kinesin motor domain profile. 463 791 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 327 367 - -
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 1032 1048 - -
Tsu07g04423 1060 SMART kinesin_4 461 799 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04423 1060 Coils Coil 443 463 - -
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 997 1060 - -
Tsu07g04423 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 463 826 IPR027417 -
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 302 326 - -
Tsu07g04423 1060 ProSiteProfiles Calponin homology (CH) domain profile. 67 189 IPR001715 GO:0005515
Tsu07g04423 1060 CDD KISc_C_terminal 461 793 - -
Tsu07g04423 1060 ProSitePatterns Kinesin motor domain signature. 691 702 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu07g04423 1060 PANTHER KINESIN-LIKE PROTEIN KLP-3 53 1048 - -
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 826 864 - -
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 368 384 - -
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 920 934 - -
Tsu07g04423 1060 PRINTS Kinesin heavy chain signature 661 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04423 1060 PRINTS Kinesin heavy chain signature 741 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04423 1060 PRINTS Kinesin heavy chain signature 539 560 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04423 1060 PRINTS Kinesin heavy chain signature 692 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04423 1060 MobiDBLite consensus disorder prediction 865 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04423 Tsu-Chr7 49362743 49369459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04423 451 827 Calmodulin-binding Proteins AT5G65930 40.526 1.20e-76 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04423 K10406 - gmx:100799535 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04423 07 49362743 49369459 Tsu07g04423 07 49362743 49369459 ECH