Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04416 ATGGACATTGACTACGATGATCTCTTCTACTTCACTGCAGAGTCTCAAATCAGTACAAACTCACATGGTTGCAAGGTTGATTCTCAACTGAGAAAGAATGTTGTTGATTGGTTGATACAAAAGCATTATGAACAAAAGCTCAATTCAGAAACCCTCTATCTTTCTATCAACATTCTCGACCGTTTTCTTTCTAAAGCTGATTTTGAAGTCACAACAAAGAGCCAATTTGAACTCATTGGTGTTACATCGTTGTTGAGTTCCGTGGGTGGCATTGGTAATAGCCTACACAGCCTCGTTCCTAAGGTTGAATTCTGCCTTCGTCAGACAGACAAGAGGAGTAATAAGATCAGCCTCAATGACGGCCTACGGAAATGA 375 0.4053 MDIDYDDLFYFTAESQISTNSHGCKVDSQLRKNVVDWLIQKHYEQKLNSETLYLSINILDRFLSKADFEVTTKSQFELIGVTSLLSSVGGIGNSLHSLVPKVEFCLRQTDKRSNKISLNDGLRK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04416 124 Gene3D - 23 85 - -
Tsu07g04416 124 Pfam Cyclin, N-terminal domain 25 85 IPR006671 -
Tsu07g04416 124 PANTHER CYCLINS 22 85 IPR039361 -
Tsu07g04416 124 ProSitePatterns Cyclins signature. 31 62 IPR006671 -
Tsu07g04416 124 PANTHER CYCLIN-B1-4 22 85 - -
Tsu07g04416 124 CDD CYCLIN 30 85 IPR013763 -
Tsu07g04416 124 SUPERFAMILY Cyclin-like 21 85 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04416 Tsu-Chr7 49313575 49315258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04416 3 85 Core Cell Cycle Gene Families AT5G06150 35.955 1.80e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04416 K21777 K21770 sce:YLR210W 64.6994