Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04413 ATGGTTTGCCAAGAAGAGTTATTgattgaaaaagtttttaatttgtatgaaCAAATTGCAAGTCTTGAATCTCTCAAACCTAGCAAAAATGTCGACATGCTTTTCACCGAACTTGTCCTCACATGCATGCCACCTAGTCCTATAGATGTCACAACTCTTCCAAAAACATTGCAAGAAAAAAGATCCCATCTTATAAGGCTATGTGGTGAAGCTGAAGGATATTTGGAGAGACACTACTCAGCCATCTTAGGCTCATACCAAAACCCTCTTGACCATCTCCATATTTTCCCTTACTATTCTAACTACATCAAACTTGGTCACCTTGAGTTTTCTATCCTAAGCCAACACTGCACTCATGTCCCTAGTAAAATTGCTTTTATTGGTTCTGGACCCCTTCCCCTTACTTCAATTGTGTTGGCATCAAATCACTTACCTTCAACCATTTTTCACAATTACGACATCGACCCTTTAGCCAATTCGAGTGCTATGCACCTGGTTTCATCTGATCCTGACTTGTCAAACCGGATGGTTTTTCATACCAGTGACATATTGGATGTGTCAAACGATTTGAAAGACTATGAAATTGTTTACTTGGCTGCCCTTGTCGGTATGGACAAGGAGGAAAAGAATCGAATCATCGATCATTTGGGGAAGCACATGGCTCCAGGAGCACTTCTTATGCTGAGGAGCGCTCATGGGGCTCGTGCTTTTCTATATCCGGTGGTTGAATCTTCTGACCTTCAAGGCTTTGAGGTCCTCTCAGTGTTCCATCCTATGGACGAGGTTATCAATTCAGTTGTCATATCGCGTAAGTATCCTATGCCTAAACACTCACTTGATCAAGGTCTTGGTTCCATGATCTTACCAAACAAGTGTTCTGAGATTCAAGTCATTAACCCCCTTAGGGGCCTCAACCATGGGAATATGATTGAGGAATTGACCATTGAGGATCAACTCTTGTAA 963 0.4102 MVCQEELLIEKVFNLYEQIASLESLKPSKNVDMLFTELVLTCMPPSPIDVTTLPKTLQEKRSHLIRLCGEAEGYLERHYSAILGSYQNPLDHLHIFPYYSNYIKLGHLEFSILSQHCTHVPSKIAFIGSGPLPLTSIVLASNHLPSTIFHNYDIDPLANSSAMHLVSSDPDLSNRMVFHTSDILDVSNDLKDYEIVYLAALVGMDKEEKNRIIDHLGKHMAPGALLMLRSAHGARAFLYPVVESSDLQGFEVLSVFHPMDEVINSVVISRKYPMPKHSLDQGLGSMILPNKCSEIQVINPLRGLNHGNMIEELTIEDQLL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04413 320 PANTHER SYNTHASE, PUTATIVE-RELATED 1 319 - -
Tsu07g04413 320 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Tsu07g04413 320 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Tsu07g04413 320 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Tsu07g04413 320 PANTHER NICOTIANAMINE SYNTHASE 3 1 319 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04413 Tsu-Chr7 49283584 49284890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04413 1 314 Nicotianamine Synthase Gene Family AT5G04950 60.188 2.01e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04413 K05953 - gmx:100803630 522.702