Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04409 ATGTCTAACACCAGCAACAATGTCGCTGGAGTTGACAACACATACAGAAGAAAATTCGATcgtgaagagtatcttgaacgTGCTCGAGAGCGTGAGAGGAAGGAAGAAGAGGGTCGAGCAAAACCTAAAGCTAAAGGTCCTGCAGTGCAGAGGAAGCCCTTGAAACATAGAGATTATGAAGTAAACCTTACATCTTCCTTGGGAAAGACTCAGGTTGTGACGCCGGTTGCACCACTAAGCCAACAGGCTGGATATTACTGTCGAGTTTGTGAGTGTGTGGTGAAGGATTCTGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCGCTGGGCATGTCTATGCGAGCTGAACGTTCTACTCTCCAACAGGTTCAGGAACGGTTTCAAGTTCAAAAGAAACGTAAAGACATTGGAGGCTTTACAGAGAAAGATTTTGATGACAGGATCTTAAGACAgcaagaagaagaggaagaaagaaAGCGATTGCGTcgggaaaagaaaaaagaaaagAAGAAGGAAGCTGTAGAAGAACCTGAAATGGATCCTGATGTTGCTGCCTTGATGGGGTTTGGTGGTTTCCGCTCATCTAACAAAAAGTGA 609 0.3957 MSNTSNNVAGVDNTYRRKFDREEYLERARERERKEEEGRAKPKAKGPAVQRKPLKHRDYEVNLTSSLGKTQVVTPVAPLSQQAGYYCRVCECVVKDSANYLDHINGKKHQRALGMSMRAERSTLQQVQERFQVQKKRKDIGGFTEKDFDDRILRQQEEEEERKRLRREKKKEKKKEAVEEPEMDPDVAALMGFGGFRSSNKK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04409 202 MobiDBLite consensus disorder prediction 158 202 - -
Tsu07g04409 202 SUPERFAMILY beta-beta-alpha zinc fingers 80 125 IPR036236 -
Tsu07g04409 202 Coils Coil 153 180 - -
Tsu07g04409 202 Gene3D Classic Zinc Finger 80 118 - -
Tsu07g04409 202 Pfam Zinc-finger of C2H2 type 85 109 - -
Tsu07g04409 202 MobiDBLite consensus disorder prediction 1 52 - -
Tsu07g04409 202 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 3 201 IPR040107 GO:0000398|GO:0005681
Tsu07g04409 202 MobiDBLite consensus disorder prediction 158 182 - -
Tsu07g04409 202 MobiDBLite consensus disorder prediction 14 44 - -
Tsu07g04409 202 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04409 4 147 C2H2 Transcription Factor Family AT3G05760 75.694 4.19e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04409 K12848 - gmx:100527057 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04409 07 49258549 49262950 Tsu07g04409 07 49258549 49262950 ECH