Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04407 ATGGAGAAAAAACGTTCTAAGGGAAGCTTCTTTAGCTTGTTTGATTGGAATGCTAAATCTCGCAAGAAACTTGTTTGGAACAATCCAACCTCACAACCTGAAGTTTCAAGGCAAGGAAAGGAAAATCTAGAGACCTTGCCAGAGTCACAATTCAATAGGATAAAGGTGGATGAAAATGGAACAAGTCCGAGTAATATTGCAAGTGGTGATTTTCACTGCACCTTATCGGTCTGTAGTGATGAAGGGTGTGGGAGTAAAGCCCCTGGGTTAGTAGCAAGACTTATGGGTTTGGATTCTCTTCCAACTTCCGAAGTCAGTGAGCTTTCCGGTGCTTCATTATACAGCTCCAACTCTCATGGAGCTTCTCATTATAATGAGGGTGCTCTTCGTTCCATGGATGACTTCCGTCGTGCGGACTACTTAAATACACCACTTAAGCCGGAGAAGTCTTCTTGGGATGCTATGGAATCAAGGGCACATAAAATGGAAAACCGGCAATTGAAGAGATTTCAAACTGAAATGTTGCCCCCAAAGTCAGCTAAACCCATTCCAGTTACTCACAATAGATTATTGTCTCCTATCAAGAGTAATGGTTATCTGCCTCAGAAGAATGTAGTTCAGATAATGGAGGCGGCTGCTAAGATAATTGATGGAAGTCCTCAGCCATATATGAGGAATAGAATACTATCACGGGAGTCTTCATCTGTTCCCTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACAATATGCACCCGTATCGAGAAGGTTAGTCGATCCGAACAATGGAAACACTTCAAATTGCAAGCCTGGTGAGAGGAGCTCTAATTTGTACAGAAGTACATCATCATTGAAGGGTTCAAGTTCAAGAGATTCTGAGAAACGTGGTTCTTGTCATCCAACAAGTAAAGGAAAATCAGGTTCTATGCAAACCAAAAACAATGTTCAAAGCAGAGATGCATTGGTTTCAAATGGAAATAGGAAATATATGAAGCAAAAAGAGCAGAATGAGACAAAGTCAAATCAGCTCACAAGGAGCCAGAAGCCAATTACAAACCGAGCATTACCACAGAAAACGAGTGCAAACCGTAATAGCAATGTGCTGGTACAGAATAATCAGAAGCAAAATAGCATGAGTTCCAAAGGTAAATCAGCTTCAAAAACAGATTTCAATAAGCCGGCAACACGAGGTTCATCTTCAGAGAATTCTAATGGAATCAGGAAGGCAACAAACAAAGGTGCTACAAATGTCAATTTTCAGCCTAAAAGGTCAAGTTCTAGGGTAGCCGATAACCGAAATGAGTTTCCCCCATCCAAAGCACATAGTATTTCCCAAAAGAAAAAGTATAACAGCAGAGGTGTTCATGATGTAAGAAGTCCTGATCATGCAAGAAATGATTTGGAAAGCAAGTCCATAAAATGCAATTTTACAACTGATGGAAGGATTGATCAGAATGCTTTTAACATGAATGAAAGCAATGATGTTGTTTCATTTACATTTACATCTCCTTTGAGGAGAAGCATGCCTGAGTCTCTTGGACATAGTGATAATCTTCATCCCAAAAAATTATCACTATCTCCGACACATATGATAGATAGTGATGCATTGAGTGTTCTGCTGGAGCAAAAGCTACAAGAATTGACATCGAGACTTAACTTACCTCAGTGTACCCTAGCCTCAGAGGAACCTTATACTGGTTTGAGATCTAGTTTTGAAGACAAAGCATCCAGCATGGTAAACAGCACAGTTAAGGAGCAAGATGAAATGTTCAATGATGACCTTAATGGAATGCATAACTATCGATACGGTTCAAGTGATGGTCCAGTGCTTAACATGAATCAGCAACTGCAGATATCAGAAGTAAGGGAAGATCCTAACAGTAGCAGCAACAATGATCTAGGTTGTCAGTATTTCAATACTGATTCAATTTTTCAAGCTCCTTCTGTCAGTGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGCAGCACAATTTATTCTTCCATGCAAGATGAAGAAGTGTCTAATATTTCCCAGATAAATGAATCCGAATCAATTGAAAATGAGTTGACATGGTCAGAGCAAAGCTCTTCAGTATCTACGGGGCACAATGTGGCTGTCACACAAATAATCAGAACACCAAACATGGTAGATTTGAAAAGATCAAGCAACATGGAACTTGAATATGTACAGAACATACTCGACAATGCAGAGTTTATGGCAGAAGAATTCATCATGGGTCGTACTAATACCGTCATAATGCCAAATCTCTTTGATCTATTGGAGAATCAGAGTACAGGAACAACATACTGTGGAGAGGAAGAGTACTCTAAGCTTGAAAGGAAGGTTATATTTGACTATGTAAGTGAGAGTCTAGAGTTGAGATGTGTAAAAGCTTTTGTTGGAGGGTGTAAAGCATGGCCTAGATGGGTGATATCAATTCAGAGGAAAGACATGTTAGCAGAAGAATTGTACAAAGAGATTATGAGTTATAGGAACATGGAAGAGCTAATGGTGGATGAGCTTGTGCTGAATAACATGAGCAGTGGATATGGGAAATGGCTTGACTTTGACATTGAAACATTTGAAGAGGGATTAGTGGTTGAAGAGGACATATTAGAAtgtttgattgatgaatttgtttCTGATTTGTTGGTTGTTTAA 2670 0.3921 MEKKRSKGSFFSLFDWNAKSRKKLVWNNPTSQPEVSRQGKENLETLPESQFNRIKVDENGTSPSNIASGDFHCTLSVCSDEGCGSKAPGLVARLMGLDSLPTSEVSELSGASLYSSNSHGASHYNEGALRSMDDFRRADYLNTPLKPEKSSWDAMESRAHKMENRQLKRFQTEMLPPKSAKPIPVTHNRLLSPIKSNGYLPQKNVVQIMEAAAKIIDGSPQPYMRNRILSRESSSVPLRILDLKERLEAAQYAPVSRRLVDPNNGNTSNCKPGERSSNLYRSTSSLKGSSSRDSEKRGSCHPTSKGKSGSMQTKNNVQSRDALVSNGNRKYMKQKEQNETKSNQLTRSQKPITNRALPQKTSANRNSNVLVQNNQKQNSMSSKGKSASKTDFNKPATRGSSSENSNGIRKATNKGATNVNFQPKRSSSRVADNRNEFPPSKAHSISQKKKYNSRGVHDVRSPDHARNDLESKSIKCNFTTDGRIDQNAFNMNESNDVVSFTFTSPLRRSMPESLGHSDNLHPKKLSLSPTHMIDSDALSVLLEQKLQELTSRLNLPQCTLASEEPYTGLRSSFEDKASSMVNSTVKEQDEMFNDDLNGMHNYRYGSSDGPVLNMNQQLQISEVREDPNSSSNNDLGCQYFNTDSIFQAPSVSESYLDSEDSAYGSTIYSSMQDEEVSNISQINESESIENELTWSEQSSSVSTGHNVAVTQIIRTPNMVDLKRSSNMELEYVQNILDNAEFMAEEFIMGRTNTVIMPNLFDLLENQSTGTTYCGEEEYSKLERKVIFDYVSESLELRCVKAFVGGCKAWPRWVISIQRKDMLAEELYKEIMSYRNMEELMVDELVLNNMSSGYGKWLDFDIETFEEGLVVEEDILECLIDEFVSDLLVV 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04407 889 MobiDBLite consensus disorder prediction 303 325 - -
Tsu07g04407 889 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 889 - -
Tsu07g04407 889 MobiDBLite consensus disorder prediction 260 289 - -
Tsu07g04407 889 MobiDBLite consensus disorder prediction 258 468 - -
Tsu07g04407 889 PANTHER DUF4378 DOMAIN PROTEIN 1 889 - -
Tsu07g04407 889 Pfam DUF761-associated sequence motif 76 106 IPR032795 -
Tsu07g04407 889 Pfam Domain of unknown function (DUF4378) 728 881 IPR025486 -
Tsu07g04407 889 MobiDBLite consensus disorder prediction 338 446 - -
Tsu07g04407 889 MobiDBLite consensus disorder prediction 451 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04407 Tsu-Chr7 49249824 49254463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04407 1 887 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 33.115 2.39e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04407 - - gmx:102663635 1088.56