Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04405 ATGCTTCAGCTGTGTCATAAAAACTGCCATTGGGCTGCTGGTTCGGCTGCTGTTTGCTGGTGTTGCAGCAGCTATAAGCAAAAAGAGCAAAAAGGCAGTGATAAAATTCCTATTCCTATTCATAGATCTAAATGGAATCATGGTGGTACAAAACAACCACCAATTAGTGACCTTAGATATGTGATAGACACCCTAAGAGCTAATGGTAACGATTCCATCTACTTGGAGAATTTCATTCGAGAACTAGTAAGAGATGTGGTGGAAAGCAAAATCCAAGAGCACCGACTTTTAAGAGAAAAGTTCAATGAGGCTGGCAAATCTGGAGCTAGAACCTTAGAGTTACATTTTATCAATAATAAGATACCTGATACAATTTTTACTCAATCTAATATAGCAAAGGGTGAACCATCTCTCCAAGTTGCTCTATTTGATGTTGGATCTAAGTCAATAGTCAATAATGGTATTTACCGTTATATGTTTGGCAAGATTCCAAAGAAGTCTTGGTTTGCAATTATCGAACATGCCAAGAAGTGTGTCGTGGATGATTACAAGCTTTATAGCTATGTCGCAAATGGGCAACAAATAGCGCTGATATTCAATGCCATCTACGAACTTGTGGGAGTTGCAAATGATGCACAAAATTACTATATACCAAAGACTCTCACACCCAACCTGCAGAATATTGTAGAAGTTGTGAAGCGGGATGCTTACAAAAACGCGGACAATAATTTGGTACCAATGGATGAAGCTCAATTGAACTCCGTAAGCCTAGCAGCATGTTTAAAATCAGCAGCACAACCAGACGCTCCAGTTCAAGGTCTGCAACATACTGATATCTCTACTTCACAAGGTCAAAAAGAAACAGGACCAAGCTACGTTCAACCATGTAGCTCTACTTCATATGCTAATGAAGGAATGAATAATTGCCAAATCAATGTTGATAATTCAGTGCCAAACATAACAGAAATACCACAAAACAATGACGTGGAAGGTGAAATGTGCATCGAAGAAATACTGAATATCATAAATAATGTTCCATTTGATTTTTCTGATGTAGTAGAGTGTAGCACCAGTGTTAATTTCGTCAATTCTGGTATGGATATATCAAACAATGGGAAACCAAAAGCAGTATGGTGGTGTAAGATTCGCGCTGTTATAAAATGGGGAATATCAGTGAAAAAGGTTGCAGCTGCCAAGAGGCATTATTAG 1209 0.3838 MLQLCHKNCHWAAGSAAVCWCCSSYKQKEQKGSDKIPIPIHRSKWNHGGTKQPPISDLRYVIDTLRANGNDSIYLENFIRELVRDVVESKIQEHRLLREKFNEAGKSGARTLELHFINNKIPDTIFTQSNIAKGEPSLQVALFDVGSKSIVNNGIYRYMFGKIPKKSWFAIIEHAKKCVVDDYKLYSYVANGQQIALIFNAIYELVGVANDAQNYYIPKTLTPNLQNIVEVVKRDAYKNADNNLVPMDEAQLNSVSLAACLKSAAQPDAPVQGLQHTDISTSQGQKETGPSYVQPCSSTSYANEGMNNCQINVDNSVPNITEIPQNNDVEGEMCIEEILNIINNVPFDFSDVVECSTSVNFVNSGMDISNNGKPKAVWWCKIRAVIKWGISVKKVAAAKRHY 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04405 402 MobiDBLite consensus disorder prediction 273 292 - -
Tsu07g04405 402 PANTHER CALMODULIN-BINDING PROTEIN 159 401 - -
Tsu07g04405 402 PANTHER CALMODULIN-BINDING PROTEIN 28 154 - -
Tsu07g04405 402 PANTHER OS02G0177800 PROTEIN 159 401 IPR012416 GO:0005516
Tsu07g04405 402 PANTHER OS02G0177800 PROTEIN 28 154 IPR012416 GO:0005516
Tsu07g04405 402 MobiDBLite consensus disorder prediction 272 292 - -
Tsu07g04405 402 Pfam Calmodulin binding protein C-terminal domain 184 242 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04405 Tsu-Chr7 49234392 49238881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04405 149 239 Calmodulin-binding Proteins AT5G26920 32.979 1.68e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04405 - - mtr:MTR_7g112000 246.128