Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04403 ATGGCATCCAAGAGGACATCTCATGATGAGGAATCGGATCATAGTACTAAGAATCTTCATGTTCCTAGTACTAAGAGAATCAAACATGGCAACtcagaacaacaacaacctttATTTCCCACTACTATGATTCGTAGTGCCACCAATGACAACAACATCATTGCTTTTTGCTTTGAACCCTTAATTCGAAAAGTGATGCGAGAGGTTTTTCCACCTTTGTTCGACCGCTACCTAGCCCCAAGTGGATTGACGTTGACCATTAACAGGCAGGTCAACCCATCTAGAAGAAGACGTTTAAAATTGTGCTTCATGAACAATTTGCCCAAAAGAAATTACACACAATCTAGAATCAAAGCTGAGGGAGGTGAACCACTTCGAATTCAATTGCGCGATGCTGAAAATCAGCACATAGTGAGGGATGTGGGTTCATTGATGAAGATCCAAATTTGTGTCTTACATGGTGACTTTAGGAAAGAAGATTGGACTGCTGAGGAATTTGATAAGCAAATTGTAATTCCAAGAGTGGAAAAAGGACAACTGCTGAAAGGAGATACAGTCATTACACTAAAAGATGGAGTTGCTTATATCAACAACATGGAGATTACTGATATATGTAAAGGAAGAACCAAAGAATTTCGGTTAGGGGCTAAAATAATCCGATCTAATTCAATTGGATTGGATATTAGGGAAGGTAGAAGTGAACCTTTTAGGGTCTTGGATGTTCGAGGAAAGGCTAATGAGAAACACGATCGTCCATCGGTGAATGATGAGGTATGGCGTCTGAAAGGAATAGGTAAAAATGGTAAACTTCACACAGAGTTGATCTCACATGGAATAAAAAGTGTTAAGGATTTTTTGCAGTCATACAAAACCAATGAAGCTTCATTAAGAgagaaaataggcAAGATTACAGAGAAGTCATGGAACAAAATTATTGCAAATGTCAAAGAGTGTGatgtggatgatgatgatgaggaggaggaggaggaggaggaaagAGTTAAGCAACATGCttacaaaaaattgaatgatttgATACAAATGCCAATTGATACAGAAACAACAAAACATGGTTTGGTGGAGACATCAACAAGTGTACAAACTGCACAATATGGTGGCCAAGATCAAACTCTGCAACAATTTGACTTTTCAATTGCTCAGCAAGGCTTACTGAATACTGATCCTACAAGCTTTAACACATGCCAACCAGAAATGTCACCATTCCGAGAACTGGCATACTTGTTTGGAGAGGAAAATATATACTCTGGGTTTGATGGAGTATCACAAACTGGTCAATTTGTAAGAAGCAACTCATGGGAACAATTCAATGCCTTTGATAATAGTGATGGAGCAGGACCTAGCAATCATTCATCTTCCCTCAACTTTGCTGTGCGTATATCAAGCAATGGAAAACCGAAAAAAGATTGGCAAAAGATTCGATCAGCTCTCAAATGGTTCATGCTGTATACTAGAAAGAGAGGACCACTTGTGATCATATATACTCCTTGA 1509 0.3632 MASKRTSHDEESDHSTKNLHVPSTKRIKHGNSEQQQPLFPTTMIRSATNDNNIIAFCFEPLIRKVMREVFPPLFDRYLAPSGLTLTINRQVNPSRRRRLKLCFMNNLPKRNYTQSRIKAEGGEPLRIQLRDAENQHIVRDVGSLMKIQICVLHGDFRKEDWTAEEFDKQIVIPRVEKGQLLKGDTVITLKDGVAYINNMEITDICKGRTKEFRLGAKIIRSNSIGLDIREGRSEPFRVLDVRGKANEKHDRPSVNDEVWRLKGIGKNGKLHTELISHGIKSVKDFLQSYKTNEASLREKIGKITEKSWNKIIANVKECDVDDDDEEEEEEEERVKQHAYKKLNDLIQMPIDTETTKHGLVETSTSVQTAQYGGQDQTLQQFDFSIAQQGLLNTDPTSFNTCQPEMSPFRELAYLFGEENIYSGFDGVSQTGQFVRSNSWEQFNAFDNSDGAGPSNHSSSLNFAVRISSNGKPKKDWQKIRSALKWFMLYTRKRGPLVIIYTP 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04403 502 Pfam Calmodulin binding protein-like N-terminal domain 99 240 IPR046831 -
Tsu07g04403 502 PANTHER OS02G0177800 PROTEIN 331 492 IPR012416 GO:0005516
Tsu07g04403 502 Pfam Calmodulin binding protein central domain 254 318 IPR046830 -
Tsu07g04403 502 MobiDBLite consensus disorder prediction 1 20 - -
Tsu07g04403 502 PANTHER OS02G0177800 PROTEIN 1 322 IPR012416 GO:0005516
Tsu07g04403 502 MobiDBLite consensus disorder prediction 1 38 - -
Tsu07g04403 502 PANTHER CALMODULIN-BINDING PROTEIN 60 G 1 322 - -
Tsu07g04403 502 PANTHER CALMODULIN-BINDING PROTEIN 60 G 331 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04403 Tsu-Chr7 49198137 49200438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04403 51 324 Calmodulin-binding Proteins AT5G26920 36.559 5.11e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04403 - - mtr:MTR_7g111980 381.719