Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04402 ATGGCAGCTGCAAAATTCGACCTAGGAGCCGTTCCGTTCAACCCCGACGGATGGGGCCCACTTGATTCCACCGCCGACAACACCAACGTCCCTTTCGCTCCCTTCTCCCGTTCCGACAAATTAGGTCGAATCGCCGATTGGACTCGTAATTTCAACCCGACCCGATCCAAAAACCCTGCCGATTCCGCTTTCGATTTCACCTCCGACGCTTCCTTCCCTGCCTTCGCCGACGACGACTCCTCTTTCCGTCTCGTCGACGGTAAACCCCCACCGCGTCCCAAATTCGGTCCCAAATGGCGCTTCCAACGCCAACTTCAACTCCCTCAGCGTCGCGACGAAGAAGTCGAAGCTAAAAAACGTGAAGCCGAGAAAGAAAGAGCTCGTCGTGATCGCCATTATCAGAATCGTTCAAACCCTAGCAACCATCGCCGTGAACTTTTCAAATCATCGGTTGATATTCAACCAGAATGGAATATGCACGAACAGATCCCTTTCTCCACTTTCACAAAACTCTCATTCACTGTCTCTGAACCCGAAGATCTTCTCCTCTGCGGCGCTATCGAGAGCTACGATCGTACCTACGATCGTGTAGCTCCCAAGAGTGAACGCCGTCTTGAGAGATTCAAGAATCGGAATTTCTTCAAAGTTACCACTACTGATGACCCTGTTATTCGTAGACTCGCTAATGAAGATAAAGCTACGGTATTCGCTACCGATGCTATTCTTGCTACTCTTATGTGTGCTCCTAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGTGTAGGGAATAAGCTTTTCTTTGATAAACGTGATGGGTCACAATTGGATTTGCTTTCTGTTCATGAAACTTCTCAGGAGCCATTGCCGGAAGCTAAAGATGATATTAACTCGGCTCATTCGCTTAGCGTTGAGGCGTCTTATATTAATCAGAATTTCTCCCAGCAAGTTTTGATTAGGGATGGGAAAAAACAGACTTTTGATGAGCCTAATCCTTTTGCTAATGAGGGTGAAGAAGTTGCTTCTGTTGGTTATAGGTATAGGAGATGGAAGCTTGATAAGGATATGTATCTTGTTGCTAGGTGTGAGGTTCATAGTGTTGTTGAGCTTAATAATCAGAGGTCTTATCTTACTTTGAATGCTTTGAATGAGTTTGATCCTAAGTATACCGGTGTTGATTGGAGGCAGAAGTTGGAGACACAAAGGGGTGCTGTTTTAGCTACTGAACTTAAGAACAATGCTAATAAGTTGGCTAAATGGACTGCACAAGCTCTTTTGGCAAGTGCCGATATGATGAAGTTGGGATATGTTTCTCGGATTCATCCTCGTGATCATTTTAACCATGTGATTTTGGGTGTGGTTGGATATAAACCTAAGGATTTTGCTtcacaaattaatttgaatccCAATAATATGTGGGggattgtgaagtctcttgtggACTTGTGCATGAAATTGAACGAGGGGAAATATGTTCTTGTGAAGGATCCAACTAAGCCTCAAGTTAGGATTTATGAGGTTCCGGCTGATGCATTTGAGAACGACTATGTGGAGGAACCAATACCTGAAGAGGAGCAAGTTCAACCACAATCAGAGGGTGCTGATGATGCTAATGGTGTAGAAGCTGCTGCTGCTGGAACCAATGATGGGGAAGATAAGAAGATTGATGAACAAGCTTAA 1680 0.4405 MAAAKFDLGAVPFNPDGWGPLDSTADNTNVPFAPFSRSDKLGRIADWTRNFNPTRSKNPADSAFDFTSDASFPAFADDDSSFRLVDGKPPPRPKFGPKWRFQRQLQLPQRRDEEVEAKKREAEKERARRDRHYQNRSNPSNHRRELFKSSVDIQPEWNMHEQIPFSTFTKLSFTVSEPEDLLLCGAIESYDRTYDRVAPKSERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILATLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEASYINQNFSQQVLIRDGKKQTFDEPNPFANEGEEVASVGYRYRRWKLDKDMYLVARCEVHSVVELNNQRSYLTLNALNEFDPKYTGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILGVVGYKPKDFASQINLNPNNMWGIVKSLVDLCMKLNEGKYVLVKDPTKPQVRIYEVPADAFENDYVEEPIPEEEQVQPQSEGADDANGVEAAAAGTNDGEDKKIDEQA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04402 559 Coils Coil 110 135 - -
Tsu07g04402 559 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 6 542 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tsu07g04402 559 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 4 518 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tsu07g04402 559 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 506 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tsu07g04402 559 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 6 542 - -
Tsu07g04402 559 PIRSF Transl_init_eIF3d 1 536 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tsu07g04402 559 MobiDBLite consensus disorder prediction 106 146 - -
Tsu07g04402 559 MobiDBLite consensus disorder prediction 517 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04402 Tsu-Chr7 49193762 49197593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04402 1 557 Eukaryotic Initiation Factors Gene Family AT4G20980 74.281 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04402 K03251 - gmx:100799613 895.19