Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04393 atggCAAGTATTGCTAGTTTCATTCCATTAATATTCATGTTTCTCTGTCAATTAGCCTATGCAGGAATGAATATTACCTCAAAGCTTGCTATTCTTGGTGGCATGAACCCTCTAATCCTTGTTGCTTATCGTCAAATCTTTGGAACTATTGCCATTGCTCCATTTGCATATTTTCTTGAACgGGATATGGTTCCAAGGATGACAAAGAAAATTATGCTTCAGATTTTGGCATCTTCCTTAACAGGAGTAACAGGAAATCAGGTTTTTTATTTCGTGGGGCTAAAATATTCAACAGCAACAGTTGCATGTGCACTCACCAATTTACTCCCAGCTTTTACATTTGTCCTTGCAGTCTTATTCAGACAAGAGAAATTGGGAATAATGACGAAGAGGGGTATAGCCAAGGTTGTAGGGACCATTTTGTGTGTTGGTGGAGCAATACTTTTATCATTTTACCATGGTAAAATAATTGGTATTCCAGACTCAAGTATTCATTGGAGTTATGCTCAGAAAGTTCAAGGTGGTAGTGGTGCTGCTGATAGCTCCTCACACTCACTTATAGGCCCTATTGCTTTAATTCTTAGTGCTCTTATTTGGTCAGTATGGTTCATCATTCAAGCAGATATGAGCAGGACTTTTCCAGTACCTTATACAAGCACAGCATACATGTTATTCTTAGCAAGTTTTCAATGTGTGATCTTTGCCTTGTGTTTTGATCATAGCGTCTCATCTTGGTCACTACTTGATTCTATGAGACTTACCTCTTCTCTTTATTCTGGAGTAATTTGCACTGGACTTACGTATTGTATATTTTCGTGGACCATTGAAAAGAAAGGGCCACTCTATGTGTCTGTATTTACCCCAATGCAGCTTATCCTTACAGCTATCATTAGCTGGGCTTTTATCCGGGAAAAATTATTCCTTGGAACGGCCATAGGGTCTGTTCTGATAGTTGGTGGGCTTTATGCTGTTTTGTGGGGAAAGAGCAAAGAGGTGGGTGTGGATAGCAACAGAGTGGATGAtgctgatgatgatgatgatgatgaagactGTGCCCAAGGAGGAATTAAGAAGAATGATATGGAAATGCAATCTTATACACCATCCAATGGTAACGGCCACATATGA 1128 0.3821 MASIASFIPLIFMFLCQLAYAGMNITSKLAILGGMNPLILVAYRQIFGTIAIAPFAYFLERDMVPRMTKKIMLQILASSLTGVTGNQVFYFVGLKYSTATVACALTNLLPAFTFVLAVLFRQEKLGIMTKRGIAKVVGTILCVGGAILLSFYHGKIIGIPDSSIHWSYAQKVQGGSGAADSSSHSLIGPIALILSALIWSVWFIIQADMSRTFPVPYTSTAYMLFLASFQCVIFALCFDHSVSSWSLLDSMRLTSSLYSGVICTGLTYCIFSWTIEKKGPLYVSVFTPMQLILTAIISWAFIREKLFLGTAIGSVLIVGGLYAVLWGKSKEVGVDSNRVDDADDDDDDEDCAQGGIKKNDMEMQSYTPSNGNGHI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04393 375 MobiDBLite consensus disorder prediction 337 375 - -
Tsu07g04393 375 PANTHER WAT1-RELATED PROTEIN 10 364 IPR030184 GO:0016021|GO:0022857
Tsu07g04393 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 329 - -
Tsu07g04393 375 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Tsu07g04393 375 Pfam EamA-like transporter family 8 150 IPR000620 GO:0016020|GO:0016021
Tsu07g04393 375 PANTHER WAT1-RELATED PROTEIN 10 364 - -
Tsu07g04393 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Tsu07g04393 375 MobiDBLite consensus disorder prediction 360 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04393 Tsu-Chr7 49148399 49152219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04393 8 373 Nodulin-like Gene Family AT1G09380 50.000 9.84e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04393 - - gmx:100798142 484.567