Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04379 ATGGGCGGAGGTGGACCACCGACGATTAACACCAACGCGGAAGCGCAGTATACGGCGGCGAAGACTTCAGTATGGTGGGATATAGAGAACTGTCATGTTCCTAAAGGTTCCGATCCACATGCTATTGCACAGAATATCAGTTCAGCTCTTGTTCGTATGAACTATTGTGGTCCCGTTTCCATCTCCGCCTATGGCGATACCACTCGTATTCCCGCGTCTGTACAACACGCTCTTTCTAGCACCGGAATTTCCCTCAATCATGTTCCCGCCGGTGTGAAAGATGCAAGTGATAAGAAAATCCTTGTCGACATGCTGTTTTGGGCAGTGGACAACCCTGCGCCtgctaattatttattaatttcggGTGATCGAGATTTTTCTAATGCCCTCCATCAACTGCGAATGAGGAGGTATAATATTCTTCTTGCGCAACCTCAAAATGCATCTGCACCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTTTGGACTAGTCTCTTAGCTGGAGGAGCTCCATTAGAGTCACACCAACTGGGTAATAGTAGCGTCTTACCATCTTCTGAAACTTTACAAATTCCTGTCTCAAATGCCGCTCAGACACAGCAACAGGGAGGTCCCTATTCCGATGTTCATGCAGGAAATTCAAAATTCCAAAATGGAGGAAGGGGATTTGATTCTAGATATCAGGGGCGACCAACTTGGAGAAACCCGAGTCAACCCAATGGACAGAAAGCCATGAATCCACCCCCAGTTGGACCTCAAGATAACCGTAATAACGTAAACAATTATCGACCTGGCAACTATAATCCAAATGTTCCTCCAAGCGGACCCGCCACAAATTTTGTCCGCCCCAATTCTGATCAGTTATGGAGCAATAATGGTAATCAACAGGGGAATCATCAAAATGGTAATCAACAGGGAAATCATCAAAATCCTTATTCCCAGCCATCAAGACCAAACGAATTTCCATTGCAACCTCCTTTTGCACCTAGTAATTCTTCATATTCTCCAAATTCCCATGCTTTTGCAACTACACCGGTGCCACCTAGGACTAGTGGCCCCAATTTCAGTACAGGACCGCCTACAACTGTGCCAGATATTGGTAATCTGAACATTTCTGGTTATCCTAATAATGTTCATAACCCCCGTACTGTTCCGCAACGGAGTGGAGAGATGAAACCGAATCCTAAGAGTAGTGCTCCACTTCCAGTAAGATCAACGAATGAACAAAATGGACATATGGTGCATAGCAGTAGCACACAAGGCTATCCACATGGTCCAGAATATCAACCTACACCGCCGGCAGCAATGGGTAATAATAAGCTTCCTGCTAATGGTAAGTGGGGATCTTCAGGATGTCCTAAACCTTCTGAATACGTACAAGGTCTTATAGGGGTTGTTTTACTTGCCCTGAACTCATTAAAAAATGGAAAGATGATGCCAACTGAGAAGAATATAACTGATAGCATCCGTTATGGAAATCCCAAGCATCGCAACACTGATGTTAAGAAGGCTTTGGACAGTGCAATTGAGGAGCAGATGGTGGTGAAACAGAATTTAGGTACTCTGACGTTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGTGTAAATCCTTTAGGTGGAAATCCTAAACAGCACCCAAAAGAAATTTGGGACgaaattcaaaattttttaaCAACCCCTGCCGGAAGATCTGCAATAATGGGTACACAGTGCAAGTaa 1722 0.4384 MGGGGPPTINTNAEAQYTAAKTSVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQNASAPLVAAAKSVWLWTSLLAGGAPLESHQLGNSSVLPSSETLQIPVSNAAQTQQQGGPYSDVHAGNSKFQNGGRGFDSRYQGRPTWRNPSQPNGQKAMNPPPVGPQDNRNNVNNYRPGNYNPNVPPSGPATNFVRPNSDQLWSNNGNQQGNHQNGNQQGNHQNPYSQPSRPNEFPLQPPFAPSNSSYSPNSHAFATTPVPPRTSGPNFSTGPPTTVPDIGNLNISGYPNNVHNPRTVPQRSGEMKPNPKSSAPLPVRSTNEQNGHMVHSSSTQGYPHGPEYQPTPPAAMGNNKLPANGKWGSSGCPKPSEYVQGLIGVVLLALNSLKNGKMMPTEKNITDSIRYGNPKHRNTDVKKALDSAIEEQMVVKQNLGTLTLYVGKNDKLWKCVNPLGGNPKQHPKEIWDEIQNFLTTPAGRSAIMGTQCK 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04379 573 MobiDBLite consensus disorder prediction 399 422 - -
Tsu07g04379 573 PANTHER LIMKAIN B LKAP 11 570 IPR024768 GO:0005777|GO:0010468|GO:1903231
Tsu07g04379 573 MobiDBLite consensus disorder prediction 197 422 - -
Tsu07g04379 573 CDD PIN_limkain_b1_N_like 21 145 - -
Tsu07g04379 573 MobiDBLite consensus disorder prediction 251 317 - -
Tsu07g04379 573 Gene3D - 12 164 - -
Tsu07g04379 573 MobiDBLite consensus disorder prediction 197 221 - -
Tsu07g04379 573 Pfam NYN domain 21 157 IPR021139 GO:0004540
Tsu07g04379 573 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 11 570 - -
Tsu07g04379 573 MobiDBLite consensus disorder prediction 326 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04379 Tsu-Chr7 49045139 49049597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04379 11 215 C2H2 Transcription Factor Family AT5G61190 67.619 6.73e-84 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04379 - - gmx:100794608 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04379 07 49045139 49049597 Tsu07g04379 07 49045139 49049597 ECH