Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04378 atgaaacaaaaatatggtGGTTTTGCAAATGTTCATAATGAAATGGATGATGATTCAaaagaggaagatgaattgTTTGCAAACATAGTAATCATGGGTGTCTCATTGTTGCTTCTTGGATTGGCAACCATTGCTTTTGTTACCAATATTGGTGGCTCCAAAACCGAACCTGTTCTTAAGAATCTTGAATCAATCTGTTCAAAAACTGAGGTACCAGAGACTTGTGTTCATATCTTAAAACATGTAGGTGATAGAGCCACGGTTTTGGATTATATAAAAGCTTCTCTTAATGCAACCCTTGAAGAAATTTTGGTAGTTAATATACCTAAACCTTATGTTGAAAAACTTCTAACACCTTTGCAAGCACAATCATATAGAGATTGTTTGGAATTGTTGGATATGGGAGCAGATGAACTAAATTTTTTGTATATGATCGCGAATTCGTCTGTTGAAGAGGTAATGCAAGTAAACCCGAAAGATCTTATGAATAGCCTAAGTGCTATAATTTCATATCAACAAACTTGTGCTAATGAATTGGTGAGAACAAATAGTTACGAGATTTTTGGGTATTCTTTGAGCATACCAATTCTTTTTACAAAGATGACATTAGCCATTGTTGAGAATTTCGTCAAGATTCCAGAAGTCGATGATCAAGAACTTGAAGGGTATAAAAAATTCCAAACAAAAGCTTATGAGCACACATTTATGGGAATTGAGAAGACAAGAAAAGTTGTGGCTAAAGATGGAAGTGGCAATTTTACAAATATAACTGAGTCAATTCATGCATGTGCAATGAATATAGAGGAGTCATGTGTTATTTATGTGAAGAAAGGTAAATATGAGGAGAGAGTTGTGATACCTAACAATTTAGAACAAGTGTTCATGTATGGTGATGGCCCTATGGATACCATTGTTACTGGTATCACCATAAGAGACCCCATGGTTACAACTCCCTTTCAGTCAGCTACTTTTGTGGTAAAGGGGAAAGGATTTATCTGCAAAAATATGGGATTCATTGCTCCGGCTAATATAACAGGAGCATCAGCACTCCTTGTACTTTCCGATCGGGCAGTATTCTTCAATTGCAaaattgatggtgaagaagGAAGCTTATACGCAGTTGCGCAGCGCCAATTCTATAGAGATTGCGAGATTCGTGGCAGCGTAGACATCATCAAAGGAGATTCAACAACCTTAATCCAAAACTCAATAATCATTGTGAAGCATAGAAATTTAACTAACTTAGCTTTAAGAAAAAATGTGGTGAGTGCTCAAACAAGATTAGACAAATATGAAAGAACTGGTCTTGTGATTCAAAACTGCACCATCGTAGCAGAACAAGGCGGAAACAGTCTTGTTAGTTCAACATGTTTAGGAACTCCGCGTAATGAATATTCAAGAACAATCGTAATGGAATCATTTCTTGGTGATGTTATACGTCCAAAAGGTTGGTGTAAATGGAGTGACAATTATGGAATTGATACAGCAACATTTAGAGAGTATAATAACAGAGGACCTGGTGCAGGAACTAATAAGAGGGTGCATTGGTTAAGTTATAGAACAATTTCTCAGAATCAGAGACTTGAAATGAAAAATTTTACTGCTGCTGAGTTTATTCAAGCAAATCAATGGTTGATACATACAGGCATTCCATATGAATctggttttttcttttataaatag 1683 0.3446 MKQKYGGFANVHNEMDDDSKEEDELFANIVIMGVSLLLLGLATIAFVTNIGGSKTEPVLKNLESICSKTEVPETCVHILKHVGDRATVLDYIKASLNATLEEILVVNIPKPYVEKLLTPLQAQSYRDCLELLDMGADELNFLYMIANSSVEEVMQVNPKDLMNSLSAIISYQQTCANELVRTNSYEIFGYSLSIPILFTKMTLAIVENFVKIPEVDDQELEGYKKFQTKAYEHTFMGIEKTRKVVAKDGSGNFTNITESIHACAMNIEESCVIYVKKGKYEERVVIPNNLEQVFMYGDGPMDTIVTGITIRDPMVTTPFQSATFVVKGKGFICKNMGFIAPANITGASALLVLSDRAVFFNCKIDGEEGSLYAVAQRQFYRDCEIRGSVDIIKGDSTTLIQNSIIIVKHRNLTNLALRKNVVSAQTRLDKYERTGLVIQNCTIVAEQGGNSLVSSTCLGTPRNEYSRTIVMESFLGDVIRPKGWCKWSDNYGIDTATFREYNNRGPGAGTNKRVHWLSYRTISQNQRLEMKNFTAAEFIQANQWLIHTGIPYESGFFFYK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04378 560 CDD PMEI-like_3 64 211 - -
Tsu07g04378 560 PANTHER PECTINESTERASE 18 557 - -
Tsu07g04378 560 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 18 557 - -
Tsu07g04378 560 SMART PMEI_2 57 205 IPR006501 GO:0004857
Tsu07g04378 560 Pfam Pectinesterase 244 542 IPR000070 GO:0030599|GO:0042545
Tsu07g04378 560 SUPERFAMILY Pectin lyase-like 242 554 IPR011050 -
Tsu07g04378 560 Coils Coil 414 434 - -
Tsu07g04378 560 Gene3D - 239 556 IPR012334 -
Tsu07g04378 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 209 IPR035513 -
Tsu07g04378 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 59 209 IPR035513 -
Tsu07g04378 560 Pfam Plant invertase/pectin methylesterase inhibitor 62 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04378 Tsu-Chr7 49042107 49044135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04378 60 557 Carbohydrate Esterase AT2G26450 32.567 2.50e-80 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04378 K01051 - gmx:102665007 631.713