Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04368 atgGTGAAACTTTTCATGGTTTGCATTGCAACAGGACTTGTTTTCACAAACTTGGTTTATGGGTTTGTTGTAGGATATGATCAATATCACTTCAATGAAACTGAAGAACTCTTACTGTTAGAAACTCATGAACATGAATCATTCTATTCCTCATCCTTGCTTGAGGGAAACGAAAATCCTCTGCTTGTAGGACTCACCCTTATCCACAATGCAGCTTCTAAAGGAGCAGTGTGCTTGGATGGAACATTACCTGGTTACCATCTGCATCGTGGATATGGATCAGGAGCAAACAGTTGGCTTGTTAATTTAGAGGGAGGTGGATGGTGTAACAATGTTAGAACATGCGTTTATCGCAAGAAAACACGGCGTGGATCATCATTATTCATGGAAAAAGAGATACCATTCACAGGAATACTGAGTAATAAACCTGAAGAAAATCCAGATTTTTTCAATTGGAATAGAGTCAAACTTCGTTATTGCGACGGTGGCTCATTTGCGGGGGATGGTGAAGATCAGGTTGCAGAACTGCAATTCAGAGGACAACGTATTTGGGCAGCTGCGATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCTAATCAGGCTCTTCTTTCCGGATGTTCTGCGGGTGGCCTAGCTACTATTATACACTGCGATGAATTTCGAGGTCTTTTTCCGAGGACTACTAAAGTGAAATGTCTAAGTGATGCAGGGTTGTTTCTTGATTCGATTGATATATCTGGTGAACGGACCCTCCGGAATATGTACAATGGTGTTGTAGGGTTGCAGGAAGCACAGAAAAATCTACCACAAATTTGTACTAATCACCTTGATCCTACCTCGTGCTTCTTCCCTCAAAATTTGATTGCTAGTGTTAGAACACCGCTTTTTCTTCTTAATACAGCTTATGATTCATGGCAGATCCAGTCAAGTTTAGCTCCTCCATCAGCAGATCCACATGGCTATTGGCATGATTGCAGATTAAATTTTGCTAAATGTACTAGGCCACAAATCCAATTTCTGCAAGGATTCAGGAATCACATGTTGAACTCTATTAAAGACTTCTCAAGATCAAACAAGAATGGATTGTTTATTAATTCCTGTTTCGCTCATTGCCAAACCGAGAGGCAAGATACATGGTTTTCGGACAATTCTCCTGTTATTGGCAACAAGGTAATTGCTTTAGCTGTCGGAGACTGGTATTTCGACCGAGCAGGCGTTAAGGTCATTGACTGTCCATATCCTTGTGATAATACATGTCACCATCTGGTTTTCAGTTGA 1281 0.4083 MVKLFMVCIATGLVFTNLVYGFVVGYDQYHFNETEELLLLETHEHESFYSSSLLEGNENPLLVGLTLIHNAASKGAVCLDGTLPGYHLHRGYGSGANSWLVNLEGGGWCNNVRTCVYRKKTRRGSSLFMEKEIPFTGILSNKPEENPDFFNWNRVKLRYCDGGSFAGDGEDQVAELQFRGQRIWAAAMEDLMSKGMRFANQALLSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDSIDISGERTLRNMYNGVVGLQEAQKNLPQICTNHLDPTSCFFPQNLIASVRTPLFLLNTAYDSWQIQSSLAPPSADPHGYWHDCRLNFAKCTRPQIQFLQGFRNHMLNSIKDFSRSNKNGLFINSCFAHCQTERQDTWFSDNSPVIGNKVIALAVGDWYFDRAGVKVIDCPYPCDNTCHHLVFS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04368 426 Pfam Pectinacetylesterase 59 405 IPR004963 GO:0016787
Tsu07g04368 426 PANTHER NOTUM-RELATED 6 425 IPR004963 GO:0016787
Tsu07g04368 426 PANTHER PECTIN ACETYLESTERASE 6 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04368 Tsu-Chr7 48953254 48956694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04368 62 425 Carbohydrate Esterase AT1G57590 73.352 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04368 K19882 - gmx:100788448 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g03623 01 44047981 44052222 Tsu07g04368 07 48953254 48956694 ECH
Tsu01g03652 01 44295676 44299613 Tsu07g04368 07 48953254 48956694 ECH
Tsu04g04410 04 51937706 51941397 Tsu07g04368 07 48953254 48956694 ECH
Tsu07g04368 07 48953254 48956694 Tsu07g04368 07 48953254 48956694 ECH
Tsu07g04368 07 48953254 48956694 Tsu01g03623 01 44047981 44052222 PCT