Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04349 ATGGCAGCGTCTTCATTCTCAACCCAATTGCTTCAATCTCCTCTCCAGCGTAATTTTAGCCATCATGTGTCTATGGTTCCAAAGTCACATACCATATCACGGATTGATTATACTAAATCATTACCATCAAGATCAAATTTTGCTTTGAAGTTTTCAACTTCGCAACAATCTGGAGCAAGGTCAATTACATACAGGAGGAGAGTCACATGTGCTGCTGCTGCTGAAAATGTTGAAGAGCTGCAAGCCAAAGTGACTACCAAATGTTTCTTTGATGTAGAAGTTGGGGGTAAACCTGTTGGCAGGATTGTTTTGGGTTTGTTCGGAGATGTTGCTCCTAAAACAGTTGAAAATTTCCGTGCTTTCATTTTACTGACTGAGTTCAATAATCTCTGTGCAGGAGAGAAAGGATATGGTTACCAAGGATGCTCCTTCCATCGTATAATCAAAGAATTCATGCTTCAGGGTGGGGACTTCACTGCAGGAGATGGAACCGGTGGAGAAAGTATCTATGGTTCTAGTTTTGAAGATGAGACTTTTGACTTGAAACATGTTGGTCCTGGAGTTTTGAGTATGGCAAATGCTGGTGCTAATACTAATGgtagtcaattttttatttgcacTGTAAAGACTCCATGGTTAGACAATCGACATGTTGTGTTTGGACATGTGATTGATGGAATGGATGTTGTGAGGACACTTGAATCTCAGGAAACAAGCAGATTAGATATCCCTAAAAAGCCTTGCAGAATTGTTAAGTGTGGAGAGCTGCCTATAGATGTCATTAGATCTGAGGAGACTCACACACATCACCATCTCTCTCCTCAGTATATCTTAGAAAACGATGTTGTTTCACTTCCAGATGCAGCAGCTCTCCAACCTCAACCTCTCATGGTACCACTCACTCTTATTCATGGAGCTGATTCTAAAGGAGcagTATGTTTGGATGGAACATTACCGGGTTACCACTTTCACCCCGGATCTGGATCCGGTGCAAATAGTTGGCTCATTCAATTAGAGGGAGGAGGATGGTGTAACACCATCAGAAGTTGTGTCTTTAGAAAAACTACTCGTCGCGGTTCCTCAAATCACATGGAAAAGCAACTACCATTCACAGGGATACTTAGCAATAAAGCTGAAGAAAATCctgATTTCTTTAACTGGAACAGAATCAAAGTGCGGTACTGCGATGGAGCATCTTTCAGCGGAGACAGTCAAAACGAGGCTGCACAACTTCAATTTAGAGGACAAAAAATATGGCTGGCTGCAATGGAAGAATTATTGTCCAAGGGAATGAAGAACGCCAATCAGGCTCTTTTATCTGGATGCTCTGCGGGTGGTCTGGCATCTATACTACATTGTGACGAGTTCCGTAGTTTGCTTCCAAAATCTACTAAAGTGAAGTGTTTAAGTGATGCTGGATTTTTTCTTGATGCAACTGATATCTCTGGCGGGCACACATTGAGGAATCTGTTTGGAGGTGTTGTTAACTTACAGGAAGTGCAAAAAAATCTACCAAAAAGTTGTCTCAACAACCTGGACCCAATTTCGTGCTTCTTTCCTCAAAATTTGATCAATCATGTTCAGACTCCACTGTTTCTGTTGAATGCAGCTTATGATGCATGGCagCTCCAAGAAAGCTTAGCCCCGCCTTCAGCAGATCCTCACGGCTCTTGGAATAATTGTAAATCAAATCATGCAAATTGTGACTCATCCCAAATTCAGACCCTCCAAAACTTCAGAAACCAAATGCTAAATTACATGAAAGGATTCTCAACAACGTCTCAATCTGGATTATTCATTAATTCTTGTTTTGCACATTGCCAATCGGAGAGACAAGACACATGGTTTGCTGATGACTCTCCGCTCCTTAACAACATGCCAATTGCTATTGCCGTTGGAAATTGGTTTTTCGATCGTCAAGTTGTCAAAGCTATTGACTGTGCTTACCCCTGTGACAATACCTGCCATAATCTGGTCTTCAATGTTGGTAGATCTTCTGTGGTGGACTCTCAGTCCACAAGTGATGATATTCCTACCAACATGCTATATTCACGCTCGACAAGATTGACGTTTAGTGCTGGCTTACTTGTACTGAGTGCTTTATTGCCAATTACATGCTCCTAA 2124 0.411 MAASSFSTQLLQSPLQRNFSHHVSMVPKSHTISRIDYTKSLPSRSNFALKFSTSQQSGARSITYRRRVTCAAAAENVEELQAKVTTKCFFDVEVGGKPVGRIVLGLFGDVAPKTVENFRAFILLTEFNNLCAGEKGYGYQGCSFHRIIKEFMLQGGDFTAGDGTGGESIYGSSFEDETFDLKHVGPGVLSMANAGANTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRTLESQETSRLDIPKKPCRIVKCGELPIDVIRSEETHTHHHLSPQYILENDVVSLPDAAALQPQPLMVPLTLIHGADSKGAVCLDGTLPGYHFHPGSGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSNHMEKQLPFTGILSNKAEENPDFFNWNRIKVRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELLSKGMKNANQALLSGCSAGGLASILHCDEFRSLLPKSTKVKCLSDAGFFLDATDISGGHTLRNLFGGVVNLQEVQKNLPKSCLNNLDPISCFFPQNLINHVQTPLFLLNAAYDAWQLQESLAPPSADPHGSWNNCKSNHANCDSSQIQTLQNFRNQMLNYMKGFSTTSQSGLFINSCFAHCQSERQDTWFADDSPLLNNMPIAIAVGNWFFDRQVVKAIDCAYPCDNTCHNLVFNVGRSSVVDSQSTSDDIPTNMLYSRSTRLTFSAGLLVLSALLPITCS 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04349 707 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 215 230 IPR002130 GO:0000413|GO:0003755
Tsu07g04349 707 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 IPR002130 GO:0000413|GO:0003755
Tsu07g04349 707 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 202 IPR002130 GO:0000413|GO:0003755
Tsu07g04349 707 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 156 IPR002130 GO:0000413|GO:0003755
Tsu07g04349 707 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 202 214 IPR002130 GO:0000413|GO:0003755
Tsu07g04349 707 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 139 156 IPR020892 GO:0003755|GO:0006457
Tsu07g04349 707 PANTHER NOTUM-RELATED 273 676 IPR004963 GO:0016787
Tsu07g04349 707 Pfam Pectinacetylesterase 292 641 IPR004963 GO:0016787
Tsu07g04349 707 PANTHER PECTIN ACETYLESTERASE 273 676 - -
Tsu07g04349 707 Gene3D - 72 264 IPR029000 -
Tsu07g04349 707 CDD cyclophilin_ABH_like 87 254 - -
Tsu07g04349 707 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 90 254 IPR002130 GO:0000413|GO:0003755
Tsu07g04349 707 SUPERFAMILY Cyclophilin-like 83 257 IPR029000 -
Tsu07g04349 707 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 89 255 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04349 Tsu-Chr7 48762712 48770986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04349 282 679 Carbohydrate Esterase AT3G62060 69.173 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04349 K19882 - gmx:100785270 764.607