Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04337 ATGACAATGTCTGTGATTAGAACAAAAAGAAACTTGGTTAAACCTGCCAAGGAGACTCCATTTACCGTGCTAGATTTATCGGCAATCGATCAATTACCTGTTCTAAGATGCAATGTTAAAACCTTGCATGTGTTTAGACATGGCCCTGAAGCACCAAGGGTCATAAGAGAGGCATTGTCGCTAGCACTCGTTCCCTACTATCCTCTTGCAGGACGAGTTAAAGAGTCCAAACCTTGGTGCCTCCAAATTGAATGCTCCGGTGACGGTGTGTGGTATGTTGAGGCATCAACTGATTGCAAACTTGACTCTGTCAATTTCTTTGATGACACGGAGTCAATTCCATATGGTAATCTTCTTCCCGATGATGTTCACGAGATCAAACCCATTGATCCCCTTGTTCAAATGCAGGTGACACAATTTGGTTGTGGGGGTTTTGTGATAGGTCTAGTGTTCAGCCATAGCATATGTGATGGCCTTGGTGCTGCACAATTTCTAAATGCAGTTGGGCAGCTAGCTAGAGGACTTGACAAACCCACCATCGAACCGGTGTGGAATAGGAACTTTTTTCCCTCTCCTCAAGCACCTTCACTGCCAAAACTATCTCTTGCTGGTCCACCTCAAATGCCAAACTACAATCTAGAGCATTCTAACATAGACATACCTATGGATCAAATCAACCAGCTGAAGAGACAGTTCCAGCAAGTAACTGGACAAAGTTGTTCTACCTTCGAAATTGTTGCTGCATTGTTTTGGAGCAGCAGAACAAGAGCCATAAATTTTGATCCCAACACCCAAGTGAAGCTTGTGTTCTTTGCAAATTGTCGACACCTCATAAACCCTCCTCTACCCAAGGGTTTCTACGGAAACTGTTTCTTCCCAGTGACAACTACAGCTTCATGCGAGTCACTTAGAAAAGCACCAAATATTTTTGAAGTGGTGAAGCTGATCCAAGAAGCAAAGGCCAGGTTACCTTTGGAGTTTGTTAAGTACTTGAAGGGTGAGCATATAAACGATGGTGATAAGATTGAGGAGGATCCATTTGCACCTACACCAAATTATGCCACACTCTTTATGTCTGAGTGGGGGAGGTTGGGATTCGACAATGTAGACTATCAGTGGGGTCCACCTGTCCATGTGGTCCCCATTCAAGGGTCTAGCATTGTACCAGCCGGCATTATGCGCTCGCTGCCTCTCCCGAACAGAGGGATCCGTTTGGTTACATGGTGCGTGGAGGAGGCACATCGCCTTCCCTTCATTGATCAAATACATGGTCTTATAAAGCAGCAAGTGCTATAG 1296 0.4491 MTMSVIRTKRNLVKPAKETPFTVLDLSAIDQLPVLRCNVKTLHVFRHGPEAPRVIREALSLALVPYYPLAGRVKESKPWCLQIECSGDGVWYVEASTDCKLDSVNFFDDTESIPYGNLLPDDVHEIKPIDPLVQMQVTQFGCGGFVIGLVFSHSICDGLGAAQFLNAVGQLARGLDKPTIEPVWNRNFFPSPQAPSLPKLSLAGPPQMPNYNLEHSNIDIPMDQINQLKRQFQQVTGQSCSTFEIVAALFWSSRTRAINFDPNTQVKLVFFANCRHLINPPLPKGFYGNCFFPVTTTASCESLRKAPNIFEVVKLIQEAKARLPLEFVKYLKGEHINDGDKIEEDPFAPTPNYATLFMSEWGRLGFDNVDYQWGPPVHVVPIQGSSIVPAGIMRSLPLPNRGIRLVTWCVEEAHRLPFIDQIHGLIKQQVL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04337 431 Pfam Transferase family 4 382 - -
Tsu07g04337 431 Gene3D - 1 201 IPR023213 -
Tsu07g04337 431 Gene3D - 202 418 IPR023213 -
Tsu07g04337 431 PANTHER ACYL TRANSFERASE 4 1 423 - -
Tsu07g04337 431 PANTHER ACYL TRANSFERASE 4 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04337 Tsu-Chr7 48657074 48658596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04337 3 414 Monolignol Biosynthesis Gene Families AT5G48930 29.120 1.74e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04337 - - gmx:100783128 642.499