Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04330 ATGTTTACCGCACCCTTTACCAACGAAGCAACGGGGTTCATTGCAAGGGACATGACATTTCAGAACACAGCCGGTCCTATTGGTGAACAAGCTGTTGCTTTCCATAACCAAGGAGATAGGTCTGCTATCGTTAATTGCCATTTCGAGGGTTACCAAGACACCTTGTACGTTCACGCCAACAGACAATTCTACCGCGACTGTGTTATCTCTGGTACCATCGATTTCATCTTTGGAACATCTCACACCTTGATCCAAAACTCTGAGATAATCCTAAGGAAGCCCGGCGTAAATCAAACCGTCAACACAATTACCGCAGACGGAACAGGAGTTTCTAAGGATATGTTCACTGGTATTGTGATCCAGAACTGCACGATCGTTCCAGACAAAGAATTGATCCCTGTAATTACGAAAGTCAAATCTTACTTGGGCAGACCATGGAAGGAATTATCAAGGACAGTCTTCATGGAATCCAACCTCGGTGATGTAATTGATCCAAAAGGATGGACCCCTTGGCCAGATAACGGCACTGAAATAAATATAGACAGGTGTTACTATGCAGAGTATGCCAACACTGGACTTAGTGCCAATACTTCCCAGAGGGTCAAGTGGAAGGGTTATCAGGGTATTATTAGCTGGGACGTGGCTCAAAACTTCATCGGTAATAAATGGCTCAAGCCTAGAAACGGTACAAAGGACCAAAAGTATGCAAAGGAATGGTTGACTCCCGATGTTCCTCACTACCTTGGCTTTGCAAACAAgcctgaaaataaattaaacatgtAA 783 0.4317 MFTAPFTNEATGFIARDMTFQNTAGPIGEQAVAFHNQGDRSAIVNCHFEGYQDTLYVHANRQFYRDCVISGTIDFIFGTSHTLIQNSEIILRKPGVNQTVNTITADGTGVSKDMFTGIVIQNCTIVPDKELIPVITKVKSYLGRPWKELSRTVFMESNLGDVIDPKGWTPWPDNGTEINIDRCYYAEYANTGLSANTSQRVKWKGYQGIISWDVAQNFIGNKWLKPRNGTKDQKYAKEWLTPDVPHYLGFANKPENKLNM 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04330 260 Pfam Pectinesterase 3 224 IPR000070 GO:0030599|GO:0042545
Tsu07g04330 260 Gene3D - 2 238 IPR012334 -
Tsu07g04330 260 PANTHER PECTINESTERASE 1 242 - -
Tsu07g04330 260 SUPERFAMILY Pectin lyase-like 3 226 IPR011050 -
Tsu07g04330 260 PANTHER PECTINESTERASE 1 242 - -
Tsu07g04330 260 ProSitePatterns Pectinesterase signature 2. 69 78 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04330 Tsu-Chr7 48621261 48622134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04330 2 225 Carbohydrate Esterase AT4G33230 50.893 2.33e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04330 K01051 - gmx:100815015 277.715