Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04322 ATGGATGACTGTTGTGCTGTTTGCGCCGAGCCATTGGAATGGGTTGCATACGGACCTTGTTCACACCGTGAAGTCTGTTCCACATGCGTCGCTCGTCTCCGTTTCATTTGCGATGATCGCCGTTGCTGTATCTGTAAGACCGAATGCAATCTCATCTTTGTTACCAAGGCTCTTGGAGATTATACAAGGGTGATAGATTTTTCATCCCTGCCGTCAGAGGTAAAGGAAGGCAAGGTTGGACCGTATTGGTATCATGAGGATACCAATGcattttttgatgatgtggacCATTACAAGATGACCAAGGCTATGTGCAGACTTTCATGCAGTGAGTGTGACAAGATGGAGGACCAACCTAATGATGGTCCAAGGCGGCGAGAAAGGTTTAGAAATATAGGGCAGCTGAAGGGTCATTTATTCCACCGTCATAAGTTGCATATGTGCAGTTTGTGTTTGGAGGGAAGGAAGGTATTTATATGTGAGCAAAAACTGTATACTAGAGCCCAGTTGAATCAACACATAAGCACTGGCGATTCCGAGGTGGATGGAAGTGAGAGTGACAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTTTGCAGAACCCCATTTTACGGGGACAATGAACTGTACACACACATGTCTACAGAACATTATACTTGTCATATATGTCAAAGGCAGCATCCAGGCCAGTATGAATACTATAAGAATTACGATGACCTAGAGATCCATTTCCGACAACAGCATTTCTTATGTGAAGATGAGGCTTGCCTTGCCAagaaatttattgtttttcaatctGAATCAGAGATGAAGAGACATAATGCTATGGAACATGGAGGGCGTATGTCACGGTCAAAGCGTAATGCTGCTCTTCAGATACCAACTAGTTTTCGATATAGACACAATAATGAACAGGATCAACGTCGTGGAAGAGGCCGTACGTTTCGTCGTGATCATTCTGAAAATCAACTTTCCATGGCCATTGAAGCCAGTTTGGAGACTGCTAATGCTGAGCAAACATATCGTGAGCCAACTTCAAGTAATGGGCAAATTGCTTATGATGACCAGGATGCAGATATCGATTCCATCATCAATCCGTTTGAATCATTAGCTACGGCAGGTTCTGAATCAACTTCAAGATACCGTCAGGCCTTAGGGCATAGCTCTAAACCTTTGGCAGATTCTTCCTTTCCTCCACTTCCCGTAACTTCCGGCAATGGCCAGCAAAGGTCCAAACATGAGTCTGAAGGGTCATCAAGCAATACCATGGCTGCACGTTTACGTCGGCATGGCAACAGAAATATATCTGTTATTAATTCTGGAAATGCCTGGTCTGTACCTGGCCGTGGACCTGTACAACCATCAAGTACTCCTTCACaatctaaaaagtcaacaaaTCGTGCTCTTGGAGGGTCTCAGAATTCTGGCCAGACGAAGAAAGTAAGTAACAGTGTAATTCCAACATCAAGTTATGCTAATTCTATTCAAGCTGCACAGAAAACCGCTAATGGTAGAATTGTTCACTCCGCATCAGCTCCAAACCTCGTTGAGAACAACCCTGTTGGAGTTTCAATTTCTGATTTTCCTCCAGTTTCTGCTACACAAGTGAGCAAGTTACCTATGAGTAGCCAGCCTCCGTTGAATGTGGAAAATGTTCAGTCTGCCAACAAGTCCTTGGTTGAGAAAATTCGCAGTGCGCTTGATTTTGATGAAGATAGATACACAATATTTAAAGACATATCTGCTCAATATCGCCAAGGCACAATAGATACTGATACTTATGTGGATTATGTGCAGCAGTTTGGCTTGTTTGAACTTGTGCCTGAGTTAGCAAGACTATGCCCGGATCCTCGGAAGCAGAAAGAACTTGTGGAATCTTACAATGCTGGTTTGCAAAGAAATGCTTTTCTAGAAAATGACAGGGTTTATGGCAGCGCTAGCACCCAGCGTAAGGACAATAATGTCGACAAGAAAGGTAAAGGTAAGTCATTAGAGGTTAGGCGGAGTAACTCCACTGAGAGGTTAGCAGATAGCTTTTTAAACACTGTACATCAACTACAGTCAAATTATAAACCTTCAGAAGAGAAGTTGGAGGTGCTATCAAAGGGTGCTTATCGCACAGACAAAGGTAAATTTAAAACCGAGCATCAGATCGGTACAAACTCTAGCAGTCAAAATAAGGTAAAGCTTGGTGGGCAAACTGAAACGTCAAATGACAGTTTATCTAATCATCAAAATAAAGAGGATGGGGGTGGTGGGAACAAGCAACGCAAGAAAGCTTCGAAGTTTCTCAGAGTGCGCCTTGGTGATGGTTCTGCTTCGGCCCTTCTAGATTTTGAAAACTCACGGACTGCATCTGATCCTTTAACAACAGACAGTTTAGATGGCAATCAGAATGATTCTGGAGTTGGACTGCCCGTGCGAGGTGTTTGGCGAAAGGGTGGAGGTCAAAAACTCTTCCCCTAA 2469 0.4281 MDDCCAVCAEPLEWVAYGPCSHREVCSTCVARLRFICDDRRCCICKTECNLIFVTKALGDYTRVIDFSSLPSEVKEGKVGPYWYHEDTNAFFDDVDHYKMTKAMCRLSCSECDKMEDQPNDGPRRRERFRNIGQLKGHLFHRHKLHMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESDRGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQQHFLCEDEACLAKKFIVFQSESEMKRHNAMEHGGRMSRSKRNAALQIPTSFRYRHNNEQDQRRGRGRTFRRDHSENQLSMAIEASLETANAEQTYREPTSSNGQIAYDDQDADIDSIINPFESLATAGSESTSRYRQALGHSSKPLADSSFPPLPVTSGNGQQRSKHESEGSSSNTMAARLRRHGNRNISVINSGNAWSVPGRGPVQPSSTPSQSKKSTNRALGGSQNSGQTKKVSNSVIPTSSYANSIQAAQKTANGRIVHSASAPNLVENNPVGVSISDFPPVSATQVSKLPMSSQPPLNVENVQSANKSLVEKIRSALDFDEDRYTIFKDISAQYRQGTIDTDTYVDYVQQFGLFELVPELARLCPDPRKQKELVESYNAGLQRNAFLENDRVYGSASTQRKDNNVDKKGKGKSLEVRRSNSTERLADSFLNTVHQLQSNYKPSEEKLEVLSKGAYRTDKGKFKTEHQIGTNSSSQNKVKLGGQTETSNDSLSNHQNKEDGGGGNKQRKKASKFLRVRLGDGSASALLDFENSRTASDPLTTDSLDGNQNDSGVGLPVRGVWRKGGGQKLFP 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04322 822 MobiDBLite consensus disorder prediction 652 671 - -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 643 671 - -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 711 759 - -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 439 485 - -
Tsu07g04322 822 CDD RING-HC_ZNF598 5 46 IPR041888 -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 785 822 - -
Tsu07g04322 822 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 400 423 - -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 299 323 - -
Tsu07g04322 822 PANTHER ZINC FINGER PROTEIN 598 1 820 IPR044288 GO:0061630|GO:0072344
Tsu07g04322 822 MobiDBLite consensus disorder prediction 302 323 - -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 717 750 - -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 374 423 - -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 785 801 - -
Tsu07g04322 822 SMART c2h2final6 195 218 IPR013087 -
Tsu07g04322 822 SMART c2h2final6 107 143 IPR013087 -
Tsu07g04322 822 SMART c2h2final6 219 249 IPR013087 -
Tsu07g04322 822 SMART c2h2final6 250 279 IPR013087 -
Tsu07g04322 822 PANTHER EBR1 1 820 - -
Tsu07g04322 822 MobiDBLite consensus disorder prediction 450 485 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04322 1 817 C2H2 Transcription Factor Family AT3G62240 54.279 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04322 K22381 - gmx:100780426 1280.77