Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04314 ATGGCATCAGGTGGTGTTGCACCTGTTTCTGGATTTATAGACAAGAATGCAAGTTCTGTTGGTGTTGAAAAATTACCTGAGGAGATGAATGACATGAAAATTAGGGATGATAAGGAAATGGAAGCCGCCACCGTGGTAGATGGAAATGGAACCGAAACCGGACATATAATTGTCACAACCATTGGTGGTAAAAATGGCCAGCCAAAGCagACAATAAGCTATATGGCCGAGCGCGTTGTTGGACATGGATCTTTTGGTGTAGTTTTTCAGGCGAAATGTTTGGAGACGGGCGAAACTGTGGCCATAAAGAAGGTTCTTCAAGACAAGAGGTACAAGAACCGGGAATTGCAAACTATGCGCCTTCTGGACCACCCTAATGTTGTATCTTTGAAGCATTGCTTCTTCTCGACGACTGAAAAAGATGAGCTTTATCTTAACTTGGTACTTGAGTATGTTCCTGAGACTGCCAGTCGGGTGATCAGACACTACAACAAAATGAATCAAAGAATGCCTATGATATATGTTAAACTTTATTCTTACCAGATTTGCAGAGCACTTGCTTATATTCACAACAGTATTGGAGTATGTCACAGGGATATTAAACCTCAAAATTTACTGGTCAATCCTCACACTCACCAACTGAAGATATGCGATTTTGGAAGTGCTAAAGTCTTGGTAAAGGGTGAACCAAACATATCTTACATCTGTTCTAGGTACTATAGAGCTCCTGAGCTTATATTCGGCGCAACTGAGTATACCACAGCCATTGACATCTGGTCAGCTGGTTGCGTACTCGGTGAACTTTTGCTTGGCCAGCCGCTCTTTCCTGGTGAGAGTGGAGTAGACCAACTTGTGGAAATTATTAAGGTTTTAGGTACTCCAACAAGGGAAGAAATCAAGTGTATGAATCCTAATTATACAGAGTTTAAGTTTCCTCAAATCAAAGCTCATCCATGGCACAAGATCTTTCACAAGAGAATGCCACCTGAGGCTGTGGATCTTGTCTCAAGACTATTGCAATACTCTCCAAATCTTCGAAGCACTGCATTGGAGGCTCTGGTTCATCCATTCTTTGATGAGCTGCGCGATCCCAACACTAGGTTGCCAAATGGACGTTTCCTTCCTCCATTATTTAACTTCAAAGTCAATGAGCTCAAGGGAGTGCCTGCTGAGATGTTGGTGAAGCTGGTTCCACCTCATGCAAGAAAACAATttcaAGCTAGACATCACCattcacataaaaaatataagcatTCACATTCTCATAAATCATATGGAACTTCACCACCTCCTCGTCCTccttctcctcctcctccaccaccTCGTGATGATGCTTACTTCAGTAATACCTCTGAAATTTTTGATGTAAGATCATTTGGTGCCATTGGAGATGGAATAGAAGACGATACTGAATCATTTAAGACGGCATGGGATAGTGCATGCCAAAGTGAATCAGAAGTTAATGTCATCCTTGTTCCTCAAGGTTTCTCCTTCGTTGTTCAGTCTACTATCTTCACTGGTCCTTGTCAAGGTGACTTGGTATTCAAGGTGGATGGCACTATTATGGCACCTGATGGACCTGAATCTTGGCCAAAGAACAACAGTAGACGACAGTGGCTGGTTTTTTACAGAATCGATGGAATGTCATTAGAAGGAAGTGGTCTAATAGATGGGAGAGGACAAAAATGGTGGGACCTTCCATGTAAGCCTCATAAGGGATCAAATGTGACAGCATTAGGACCTTGTGATAGTCCAATTGCTATAAGGTTTTTTATATGTTCCAACTTAACTGTGCAAAGTCTTAAGGTGAAGAACAGCCCTCAGTTCCATTTCAGATTTGATGGCTGCAGTAATGTCCATATAGAATCAATTTACATTACAGCTCCAAAACTAAGTCCCAACACTGATGGAGTTCACTTAGAAAATGTCAATGATGTGAAAATATATAATTCTGTGATATCTAATGgTGATGACTGTGTGTCCATTGGATCCGGGTGCTATGATGTTGATATAAAGAACATTACATGTGGACCTAGTCATGGAATTAGCATAGGCAGTCTAGGAAATCACAACACCAAAGCATGTGTATCAAACATTACAGTGAGAGATTCAATCATAAAAATGTCAGACAATGGAGTAAGAATCAAGACATGGCAAGGTGGATCAGGATCAGTATCAGGAATAACATTCAATAATATTAACATGATTAGTGTAAGAAATCCAATCATAATTGACCAATTCTATTGCCTAACAAAAGATTGCACCAACAAAACCTCAGCAGTATCTATATCAAACATTCTTTACACAAACATCAAAGGAACTTATGATATAAAGAGCCCTCCTATGCATTTTGCTTGTAGTGATTCTGTCCCTTGCACCAACATAACACTCTCAGAAATTGAACTTCTTCCATCTCAAGGAGATATAGTGACTGATCCTTTTTGTTGGAATGCTTATGGAGATTTGGAGACATTAACTATTCCACCGGTTTCTTGTctgctagaaggcattcctCAGTCGTTGTTAGACTACGACACAGGTCATTGCTGA 2550 0.3937 MASGGVAPVSGFIDKNASSVGVEKLPEEMNDMKIRDDKEMEAATVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETASRVIRHYNKMNQRMPMIYVKLYSYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFFDELRDPNTRLPNGRFLPPLFNFKVNELKGVPAEMLVKLVPPHARKQFQARHHHSHKKYKHSHSHKSYGTSPPPRPPSPPPPPPRDDAYFSNTSEIFDVRSFGAIGDGIEDDTESFKTAWDSACQSESEVNVILVPQGFSFVVQSTIFTGPCQGDLVFKVDGTIMAPDGPESWPKNNSRRQWLVFYRIDGMSLEGSGLIDGRGQKWWDLPCKPHKGSNVTALGPCDSPIAIRFFICSNLTVQSLKVKNSPQFHFRFDGCSNVHIESIYITAPKLSPNTDGVHLENVNDVKIYNSVISNGDDCVSIGSGCYDVDIKNITCGPSHGISIGSLGNHNTKACVSNITVRDSIIKMSDNGVRIKTWQGGSGSVSGITFNNINMISVRNPIIIDQFYCLTKDCTNKTSAVSISNILYTNIKGTYDIKSPPMHFACSDSVPCTNITLSEIELLPSQGDIVTDPFCWNAYGDLETLTIPPVSCLLEGIPQSLLDYDTGHC 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04314 849 Pfam Glycosyl hydrolases family 28 486 803 IPR000743 GO:0004650|GO:0005975
Tsu07g04314 849 ProSitePatterns Protein kinases ATP-binding region signature. 80 104 IPR017441 GO:0005524
Tsu07g04314 849 SUPERFAMILY Protein kinase-like (PK-like) 73 383 IPR011009 -
Tsu07g04314 849 ProSitePatterns Polygalacturonase active site. 673 686 IPR000743 GO:0004650|GO:0005975
Tsu07g04314 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Tsu07g04314 849 ProSiteProfiles Protein kinase domain profile. 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04314 849 SMART serkin_6 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04314 849 SMART pbh1 725 746 IPR006626 -
Tsu07g04314 849 SMART pbh1 666 686 IPR006626 -
Tsu07g04314 849 SMART pbh1 696 717 IPR006626 -
Tsu07g04314 849 SMART pbh1 643 664 IPR006626 -
Tsu07g04314 849 SMART pbh1 616 642 IPR006626 -
Tsu07g04314 849 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 405 - -
Tsu07g04314 849 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 1 405 - -
Tsu07g04314 849 Pfam Protein kinase domain 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04314 849 SUPERFAMILY Pectin lyase-like 450 838 IPR011050 -
Tsu07g04314 849 Gene3D Phosphorylase Kinase; domain 1 58 153 - -
Tsu07g04314 849 MobiDBLite consensus disorder prediction 427 444 - -
Tsu07g04314 849 Gene3D Transferase(Phosphotransferase) domain 1 155 402 - -
Tsu07g04314 849 CDD STKc_GSK3 69 361 IPR039192 -
Tsu07g04314 849 MobiDBLite consensus disorder prediction 403 422 - -
Tsu07g04314 849 Gene3D - 442 832 IPR012334 -
Tsu07g04314 849 MobiDBLite consensus disorder prediction 403 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04314 Tsu-Chr7 48518144 48526114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04314 453 841 Glycoside Hydrolase AT1G02460 72.265 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Tsu07g04314 Glyco_hydro_28 9.6e-86 CL0268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04314 K00924 - nnu:104611240 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04314 07 48518144 48526114 Tsu01g03688 01 44599427 44602406 PCT