Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04313 atGGAAGAAACTTTTGTACCTCTTGAAGGTATCAAGAATGATCTAAAAGGAAGGTTAATGTGCTATAAGCAAGATTGGACAAGTGGAATCAAAGCAGGTGTAAGGATTTTGGCCCCCACAACATACATATTTTTTGCTTCTGCAATACCTGTTATTTCATTTGGTGAACAACTTGAGAGAAATACCGAGGGTGTTATAACAGCTGTTCAAACCTTAGCAGCAACTTCAATATGTGGCATTATACACTCAATCATTGGTGGTCAACCTTTATTGATTTTAGGAGTGGCAGAACCTACTGTGATCATGTATACATTCATGTTCAATTTTGCCAAAGAAAGACCTGAGTTGGGCAGGAATCTGTTTCTTGGATGGGCTGGATGGGTATGTGTCTGGACTGCATTGATACTATTCTTACTGGCAATATTAGGAGCATGTTCCATCATCAACAGGTTTACCCGAATTGCAGGCGAGTTGTTTGGCATGCTTATTGCAATGCTTTTCATGCAGCAAGCTATCAAAGGACTTGTGGATGAGTTTCGCATACCAAAGAGAGAAGATACAAAATTAGTTGAATTTTTACCTTCATGGAGGTTTGCCAATGGGATGTTTGCTTTGGTCCTTTCATTTGGCCTTCTTCTCACTGCATTAAAGAGCCGAAAGGCTAGATCATGGCGTTATGGGAGTGGTTGGCTTCGCAGCCTTATAGCCGACTATGGTGTGCCGCTTATGGTCCTAGTTTGGACAGGTGTGTCCTACATACCAACTGCAAGTGTTCCACATGGTATCCCAAGACGCCTTTTTAGTCCAAACCCATGGACGCCCGGTGCCTATGATAATTGGACTGTTGTTAAGGATATGGGTAATGTTCCTGTTGCCTTCATAATTGGAGCATTTATCCCAGCAACTATGATTGCTGTGCTTTATTACTTTGATCACAGTGTTGCATCTCAGCTTTCCCAGCAGAaagagttcaatttgaaaaagcCGTCATCTTACCATTATGATTTGCTCCTTTTGGGATTTTTGACATTATTGTGTGGCCTTATTGGAATCCCTCCTGCAAATGGAGTCATACCGCAGTCTCCAATGCATACGAAGAGTCTAGCAACTCTTAAACATCAATTGCTTCGTAACAGACTTGTTATATCCGCTCGGGAAAGTATCAGTAAGAATGCTAGTTTAGGACAGTTATATGGTAATATGCAAGAAGCATATCATCAAATGCAGACACCTCTTATTTACCAAGACCCTTCTGCTCGAGCACAAGGACTGAAAGAATTAAAAGAAACAACCATTCAAGCAGCTACAAGTATGGGAAACGTGGACGCCCCAGTCGATGAGACTATATTTGATGTCGAGAAAGAAATAGATGACTTGCTTCCTGTCGAGGTAAAGGAACAGCGTGTCAGTAACTTGCTTCAATCAGTAATGGTTGGAGGGTGTGTTGCAGCCATGCCTATTCTCAAGAAAATCCCAACTTCAGTACTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGTTTACCTGGAAACCAGTTTTGGGAAAGGATCTTATTACTCTTCACTGCGCCAAGCAGAAGATAcaaGGTGCTTGAAGATTACCATGCTACGTTCGTCGAAACAGTTCCTTTTAAGACAATCGCAACATTCACAATTTTCCAAACCATTTATCTACTTATATGTTTTGGACTAACTTGGGTACCTATTGCTGGAGTCATGTTTCCTTTGATGATCATGCTCTTAGTTCCATTACGACAGTACTTTCTCCCGAAATTTTTCAAAGGTGCACACCTTCAAGACTTGGATGCAGCTGAGTATGAAGAGCAAACTGCTTTACCATTCAACATTGCATCACAATCGGAGTTTGGAGCTGGTGCTTCTCATATTGGAGATGGTGAGATATTTGATGAAGTTCTTACTAGAAGCCGTGGTGAATTTAGGCATACTACTAACAGTCCAAAGATCAATAGCACCACTCCAACACCAAGAAATGATCCTAAAAGCCGTCTGAGCCCACGTGTCTCTTTTAATTCTCGTGTGGGCGAGTTCTCAACCGAGCAAAGTCCTAGGTCAGGCGCAAGAGGCCCCAACAGTCCAATGACCAAAGAAATGAGATCGTCATCTAGGGGAATAAGTCCTCTCAACCCTGATTCAAAACACCAAGACAACAAATAA 2175 0.4138 MEETFVPLEGIKNDLKGRLMCYKQDWTSGIKAGVRILAPTTYIFFASAIPVISFGEQLERNTEGVITAVQTLAATSICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLGWAGWVCVWTALILFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPKREDTKLVEFLPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYIPTASVPHGIPRRLFSPNPWTPGAYDNWTVVKDMGNVPVAFIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLKKPSSYHYDLLLLGFLTLLCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNRLVISARESISKNASLGQLYGNMQEAYHQMQTPLIYQDPSARAQGLKELKETTIQAATSMGNVDAPVDETIFDVEKEIDDLLPVEVKEQRVSNLLQSVMVGGCVAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPLRQYFLPKFFKGAHLQDLDAAEYEEQTALPFNIASQSEFGAGASHIGDGEIFDEVLTRSRGEFRHTTNSPKINSTTPTPRNDPKSRLSPRVSFNSRVGEFSTEQSPRSGARGPNSPMTKEMRSSSRGISPLNPDSKHQDNK 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04313 724 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Tsu07g04313 724 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Tsu07g04313 724 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016021
Tsu07g04313 724 PANTHER ANION EXCHANGE PROTEIN 1 705 IPR003020 GO:0005452|GO:0006820|GO:0016020
Tsu07g04313 724 PANTHER BORON TRANSPORTER 2-RELATED 1 705 - -
Tsu07g04313 724 MobiDBLite consensus disorder prediction 645 724 - -
Tsu07g04313 724 Gene3D Helical hairpin bin 18 60 - -
Tsu07g04313 724 MobiDBLite consensus disorder prediction 649 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04313 Tsu-Chr7 48508550 48512996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04313 1 697 Antiporters AT3G62270 81.545 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04313 K24194 - gmx:100776705 1286.17