Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04301 ATGGAGGATTATGAAATTGGATCTTATTTTCCTACCTATTCTTTATCCAGTGTGTTTGATTTATCTGAAGACAAGAGTAGTTCTGTTGGGTTTATGGAGTTATTGGGTGTGCAGAATATGAGTAATATGTTTGATTTACCTGTGGATGATGCAGTAGTAGTAAAGGAAGCACCTTTGGAGAGTAGCGGTGGAAATGAGAAGAAAGAGTGTTCAGAGGTTTTGAatagtagtattagtattaGTCAACAACAACCAGCTACTCCTAACTCTTCTTCTATTTCATCTGCTTCTAGTGAAGCACTCAATGATGAACAAACTAAAACTCTTGATCAAGCTAATAATCAACTGCACAAACAGTTGAAGGCTAAGAAAACAACAAATCAGAAGAGACAGAGAGAAGCAAGAATCGCTTTCATGACTAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAATAGCCCCTTTCCCAGGAGCTATTATCGTTGCACCACTGTTTCATGTAATGTGAAGAAACATGTGGAGAGATCTTTGAATGATCCAACCATTGTAGTCACAACCTATGAAGGGAAACACACTCATCCAAATCCAGTTATGGCTCGTTCTTCAGCTGTTCATGCTGGATCTCTATTACCACAACCTGAATGCACCACTAACTTTGCCTCTAATATGTCTCAATATTATAATCAGCAGCGTCAACAAGCCCTTTTTAGTACTTTGTCATCTTTGGGTTTCCCTTCAAAGAATGATGTTCAAGAGAGATCACTTTGTAATAATCCAAGGTTAATGGACAATGGCCTTCTTCAAGATGTTGTTCCTTCACATATGTTCAAGGAGGAGGAATAG 876 0.3813 MEDYEIGSYFPTYSLSSVFDLSEDKSSSVGFMELLGVQNMSNMFDLPVDDAVVVKEAPLESSGGNEKKECSEVLNSSISISQQQPATPNSSSISSASSEALNDEQTKTLDQANNQLHKQLKAKKTTNQKRQREARIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTVSCNVKKHVERSLNDPTIVVTTYEGKHTHPNPVMARSSAVHAGSLLPQPECTTNFASNMSQYYNQQRQQALFSTLSSLGFPSKNDVQERSLCNNPRLMDNGLLQDVVPSHMFKEEE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04301 291 PIRSF WRKY_txn_fact_IIc 1 291 IPR017396 GO:0003700
Tsu07g04301 291 SUPERFAMILY WRKY DNA-binding domain 139 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g04301 291 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 274 IPR044810 GO:0003700
Tsu07g04301 291 Pfam WRKY DNA -binding domain 148 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04301 291 Coils Coil 102 129 - -
Tsu07g04301 291 MobiDBLite consensus disorder prediction 68 104 - -
Tsu07g04301 291 Gene3D WRKY domain 130 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g04301 291 PANTHER WRKY TRANSCRIPTION FACTOR 9 274 - -
Tsu07g04301 291 SMART WRKY_cls 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04301 291 MobiDBLite consensus disorder prediction 58 104 - -
Tsu07g04301 291 ProSiteProfiles WRKY domain profile. 142 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04301 Tsu-Chr7 48419944 48421931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04301 9 290 WRKY Transcription Factor Family AT2G47260 43.902 1.00e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g04301 WRKY 2.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04301 - - cam:101495104 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04301 07 48419944 48421931 Tsu01g03721 01 44952517 44954189 PCT