Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04296 ATGCTTATATTATCTTACCTGGTATTTATGTCCGAGTCTGGTGTACATGAAAAAACTGTAGAAAATCCCCACGGGTCGAATTATGTGCTTCCTCGTGGTGCTCCAATTGTAACACCATCACCAGACAATCCTCCTTCATACGGTCCTTTCATAAATCCTAGCCAACCCCCAAAAAGTTCACATTTTTCAATCCCATTCAAGAAGAGGGGTGAATGGAAACTCCCAATTTCTGGGTTTAAAAATATTGCTCCTATTCATTCAACAGAAGCTGCAGTCCCTTCTGCTTTGACCCAGCCACCCTTGACCCATCACACTTCTAATTGTTGTAAACAAGACATGGTGTTGAAACGAGGCAGTAAGGGTTGCCACTGTGTATATCCCATAAAGCTAGACATTCGTCTTTTGAATGTCTCTCAGAATCCTGATTGGGATAAATTTCTTGAAGAATTTGCTACTCAGCTAGGGTTGCAAAATAATACCCAGATTGACCTGATAAACTTTTATGTAGTCAACTATTCAACATATAATATCTCAATGGATATTACCCCACATAAAGGCATCAGTTTCTCTGCCAGTGAAGCTGCTAAAATAAACTCTTCACTTTTAATGCACAAGGTTCGATTAGACCCTGGACTAGTAGGTGGGTACGAACTTCTCAACTTGATCTGGTTTGAACCTCCACCTCCGACTCAAGCTCCTACTTTAACTGCATCGCCGGAGAAAGCACCTCTGTATCATTCACCTAAAGCTACATCACCGAGTTCTTCAAACAAGGGAGGGCATTCAAATCTGTTTCTTATTCTAGGAATTGCTATTGGCATGCTCTTCATTGCAATTGTATCTATATTAATGTTCTGTTTATGCACCTTGCTGAAGAAGGAAAAACCACCTCCCATAGAAACTGAAAAGCCAAGGACAGAAAGTGCTGTTTCAGCTGGGGGTTCTATTCCCCACCCAACCAGTACACGATTTATTGCTTTCGAAGAACTTAAAGAAGCAACAAACAACTTTGAACCTGCAAGTGTACTTGGTGAAGGAGGGTTTGGCAAAGTTTTTAAAGGTATCTTAAGTGATGGTACTTCTGTTGCAATTAAGAGGCTTACAAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGCCGAGGTGGAAATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTATAGTAATCGCGAGTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCTAACGGAAGTTTGGAGGCTTGGCTTCATGGTCCCGTGGGAATAAATTGTCCATTGGATTGGGATACTAGAATGAAGATTGCTCTTGATGCTGCAAGAGGACTTTCGTACTTGCATGAAGACTCACAGCCGTGTGTAATACACAGAGATTTTAAGGCATCCAACATATTACTCGAGAACAATTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGTGGAGCTAATTATTTGTCTACTCGTGTCATGGGCACATTCGGGTATGTTGCTCCTGAGTATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGAGTTGTCTTGCTAGAACTGCTCACTGGAAGGAAACCTGTGGATATGTCGCAGCCAAATGGACAAGAGAACCTTGTTACTTGGGCCAGGCCAATCCTTAGAGATAAGGACCGGTTAGACGAGATAGCTGATCCAAAGCTTGGGGGAAAGTATCCAAAGGAAGATTTTGTGCGTGTGTGCACTATTGCAGCAGCATGTGTTGCTCCTGAAGCAAACCAACGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAATATCATGAGTCTGTGATAGCCTCATCTAATACACAGACCAATCTGAGACAGTCCTCTAGCACTTTTGAGTTTGATGGAACATCTTCAGTGTTCTCTTCAGGCCCTTACTCTGGTCTAAGTGCTGCCTTTGACAATGACAACATTTCTAGAACAGTGGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 2049 0.4251 MLILSYLVFMSESGVHEKTVENPHGSNYVLPRGAPIVTPSPDNPPSYGPFINPSQPPKSSHFSIPFKKRGEWKLPISGFKNIAPIHSTEAAVPSALTQPPLTHHTSNCCKQDMVLKRGSKGCHCVYPIKLDIRLLNVSQNPDWDKFLEEFATQLGLQNNTQIDLINFYVVNYSTYNISMDITPHKGISFSASEAAKINSSLLMHKVRLDPGLVGGYELLNLIWFEPPPPTQAPTLTASPEKAPLYHSPKATSPSSSNKGGHSNLFLILGIAIGMLFIAIVSILMFCLCTLLKKEKPPPIETEKPRTESAVSAGGSIPHPTSTRFIAFEELKEATNNFEPASVLGEGGFGKVFKGILSDGTSVAIKRLTSGGQQGDKEFLAEVEMLSRLHHRNLVKLVGYYSNRESSQNLLCYELVPNGSLEAWLHGPVGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGGANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPNGQENLVTWARPILRDKDRLDEIADPKLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHESVIASSNTQTNLRQSSSTFEFDGTSSVFSSGPYSGLSAAFDNDNISRTVVFSEDLHEGR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04296 682 ProSiteProfiles Protein kinase domain profile. 337 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04296 682 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Tsu07g04296 682 Gene3D Transferase(Phosphotransferase) domain 1 415 638 - -
Tsu07g04296 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Tsu07g04296 682 PANTHER OS01G0750732 PROTEIN 25 682 - -
Tsu07g04296 682 Pfam Protein tyrosine and serine/threonine kinase 341 612 IPR001245 GO:0004672|GO:0006468
Tsu07g04296 682 MobiDBLite consensus disorder prediction 232 258 - -
Tsu07g04296 682 SUPERFAMILY Protein kinase-like (PK-like) 314 614 IPR011009 -
Tsu07g04296 682 CDD STKc_IRAK 343 613 - -
Tsu07g04296 682 Gene3D Phosphorylase Kinase; domain 1 304 414 - -
Tsu07g04296 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 25 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04296 Tsu-Chr7 48362543 48366578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04296 34 682 Receptor kinase-like Gene Family AT4G02010 70.661 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tsu07g04296 Pkinase 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04296 - - mtr:MTR_7g109670 1246.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04296 07 48362543 48366578 Tsu01g03725 01 44993697 44995731 PCT