Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04294 ATGGATAGTTCAAATAATATGGTGGATTGTGGTGGTACTCTTCATGAATTTATAGAATTTGGCAAGTTTCAAGATGATGGTGTCGCTGTCGCATGTTGGGAGCCTGCAATGGATATGTGTTTTTCGTCTATGGATGACGCTAAATCTTTTTATGGAGAGTATGCTTTGAGAAAGGGGTTTGCGTGGAAGGTTAGAACATCAAAAAAAGGACCGGATGGAGAAATATGCTATGTTATTCTAGCATGCTCAAGAGAGGGGTCTAAAGCCTCAAAGGTTCCACGTACATTGAAGACACTTCCGACAAGGGTGGACCATTGTCCTGCTAAGATTTGTATTAAGATGGAAAATGATGGATTGTGGTACTTCAAAAAATTTGATCCTAACCATTCTCACGAGACCATCCCTACAAAGGCAAGGTTGTTCAAGGCTAACAAGAAAATGAAGAGGACTGTTGAAATCAATGTTGATGCGGGTGGACATGAAAATATACCGTTTTCTGAAAGAGACATGAAGAATTATGTTAACCGGGAACGGCGTGCACTTGGAAAAGAAGGTGATAGCAAGGCTATGATGAGCTATTTTAGTGAAATGAGGGAAAGGAATTCAAATTTCTTCTACGACATAGATTTAGATGACAATTTTCATgtaaaaaatgtgttttgggCTGATGCAAGAAGTAGAGCTGCTTATGAGTATTTCGGAGATGTTGTAACTTTTGACACAACATACTTGACCAATAAGTATGACATGCCTTTTGTTGTGTTTGTTGGTGTGAATCACCACGGTCAATCAACATTACTTGGATGTGGGCTGATTTCGGGAGAAGACACGGAATCATTTATATGGCTATTCAAGTCATGGCTTCGTTGTATGCTAGGAAAGGCCCCCATTGGTATTATAACTGACCAATGTAAGGCTATGCAAAATGCCATTGAGTTAGTGTTTCCTACAACACGCCATAGGTGGTGTTTATGGcatataatgaaaaaaatcCCTAAAAACCTCAATGGATGCagtgagtataaaaatattaaggcTGTCATGGAAGAAGCAGTTTATGGTACATACACAACAACTACTTTTGAAGAGAAATGGCATTCCTTCATTGACAAATTTGAGCTTCAGCAAAATAATTGGTTGAACGAGTTGTATAATGAGCGTCATAAATGGGCACCAACTTTGTTAAGGAAATATTTTTGGGCAGGTATGTCAACTATGGAACGAAGTGAGAGCGTACATGCTTTTTTTGATGGATATATCAAGTCAACAACAAGTTTAAGTCAATTTGTGAAGCAATATGATAATGCCCTTATAAAGCGAGcagaaaaagaatttgaagcaGATTTTAATTCAATGGACACTACAATTCCGTGTGGGTCAACCTCGTCCATTGAAAAGCAATTCCAAGGTGAGTACACTCATGTCAAATTCAAGGAACTTCAAGTTGAATTTAGATCCAAAATGAATTGTGTTACCTCGTTGAATATTGTGGAGGGTTGCCTTGCTACTTATCATGTGTTGGAGGATGTGGTGGTTGGAGACCAAACTAAAGAAAATGTCTTCAAAGTTGTGTTTAATAAGGAAAATCATGATTTCAGTTGTGAATGTTCATTGTTTGAGTTTAGAGGTATTTTGTGTCGCCATGTGTTATCTGTGTGTGCTCATGAAAGGATTATAAATGTGCCAAAGAAGTATGTTTTAACAAGAtggaagaaaaatattaaaagaaaacatTCATATATTAAGAACAGTTATAGTGTGGCACAATTGAACCCACAAATGGAGAGATTTGACAAATTACACAAGCATTTCTATTATGTTGCTGAAGTAGCCGCTGAGACCGAAGTTGTAACTGAGGCACTCCATGAAACATTACATCAGTTCAATTCTAATCTGCCACATTTGATGGAGGTGTAA 1917 0.362 MDSSNNMVDCGGTLHEFIEFGKFQDDGVAVACWEPAMDMCFSSMDDAKSFYGEYALRKGFAWKVRTSKKGPDGEICYVILACSREGSKASKVPRTLKTLPTRVDHCPAKICIKMENDGLWYFKKFDPNHSHETIPTKARLFKANKKMKRTVEINVDAGGHENIPFSERDMKNYVNRERRALGKEGDSKAMMSYFSEMRERNSNFFYDIDLDDNFHVKNVFWADARSRAAYEYFGDVVTFDTTYLTNKYDMPFVVFVGVNHHGQSTLLGCGLISGEDTESFIWLFKSWLRCMLGKAPIGIITDQCKAMQNAIELVFPTTRHRWCLWHIMKKIPKNLNGCSEYKNIKAVMEEAVYGTYTTTTFEEKWHSFIDKFELQQNNWLNELYNERHKWAPTLLRKYFWAGMSTMERSESVHAFFDGYIKSTTSLSQFVKQYDNALIKRAEKEFEADFNSMDTTIPCGSTSSIEKQFQGEYTHVKFKELQVEFRSKMNCVTSLNIVEGCLATYHVLEDVVVGDQTKENVFKVVFNKENHDFSCECSLFEFRGILCRHVLSVCAHERIINVPKKYVLTRWKKNIKRKHSYIKNSYSVAQLNPQMERFDKLHKHFYYVAEVAAETEVVTEALHETLHQFNSNLPHLMEV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04294 638 Pfam MULE transposase domain 236 330 IPR018289 -
Tsu07g04294 638 SMART 26again6 532 559 IPR006564 GO:0008270
Tsu07g04294 638 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 629 IPR031052 GO:0006355
Tsu07g04294 638 Pfam FAR1 DNA-binding domain 49 133 IPR004330 -
Tsu07g04294 638 PANTHER OS03G0843700 PROTEIN 34 629 - -
Tsu07g04294 638 ProSiteProfiles Zinc finger SWIM-type profile. 521 557 IPR007527 GO:0008270
Tsu07g04294 638 Pfam SWIM zinc finger 533 554 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04294 Tsu-Chr7 48351974 48354375 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu07g04294 MULE 1.6e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04294 - - gmx:102667848 734.176