Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04293 ATGGACAGTAATGCATCCCCCCAACCCGAGTCAGAAGCATCTAATTCAGACCTCAAACATGAATCTCAAGCATTCAAGAAGCGTAAAATGGTTGAGAAAACAGTTGTGACAGTGAGAATAGGGGAGAATGTTAGCAAGCTGAAGAATGAAGGACTTCCTTCAGATTTTTGGTCATGGAGGAAATATGGACAAAAGCCAATCAAAGGATCTCCATATCCAAGGGGATATTATAGGTGCAGCACATCAAAGGGCTGTTCAGCCAAAAAGCAAGTAGAGAGAAGTAGCACAGATGCTTCAATGCTTGTCATCACCTATACTTCAAAACACAACCATCCAGATCCTACTGCCGTCTCCGCCACAAACTCAGCTCAACAACCAAAAGAATCCGAAACCGAAACAATCAAAGATCTCCCAGTTACCTCCAATGAAGAAGACCAAGAAAATATCGTCGaggaaattattaataataagaGCATTGTGACTAGTACTGATCAAGTTACAAATGAAGAAAATTTTCATTACTTGCACTCTTCGATACACTGCTCCGAGGAGATCGTTATAGACCAAGAAGATCCTTTCAAACTGAACATAGAAAAGAACCATATTGACAAAATAGATATTCTCTTAGAGGAAAAGCCACTTTGCTATGCTCAGTTAAAGAATTTGACAGAATCTAAGTCAGAAGAACTTGATTTTTTCGATGAGCTTGAGGAGTTACCTATGTCTTCATCTATTTTACATTTTACTAGGAGCATTTTTTCTGATGAAAGGATTCCTGTTGCTCCTTCTTGA 792 0.3851 MDSNASPQPESEASNSDLKHESQAFKKRKMVEKTVVTVRIGENVSKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERSSTDASMLVITYTSKHNHPDPTAVSATNSAQQPKESETETIKDLPVTSNEEDQENIVEEIINNKSIVTSTDQVTNEENFHYLHSSIHCSEEIVIDQEDPFKLNIEKNHIDKIDILLEEKPLCYAQLKNLTESKSEELDFFDELEELPMSSSILHFTRSIFSDERIPVAPS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04293 263 ProSiteProfiles WRKY domain profile. 48 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04293 263 Gene3D WRKY domain 39 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g04293 263 Pfam WRKY DNA -binding domain 55 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04293 263 SMART WRKY_cls 53 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04293 263 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 248 IPR044810 GO:0003700
Tsu07g04293 263 SUPERFAMILY WRKY DNA-binding domain 50 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g04293 263 MobiDBLite consensus disorder prediction 108 133 - -
Tsu07g04293 263 MobiDBLite consensus disorder prediction 108 128 - -
Tsu07g04293 263 MobiDBLite consensus disorder prediction 1 28 - -
Tsu07g04293 263 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 11 248 - -
Tsu07g04293 263 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04293 Tsu-Chr7 48347053 48349311 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04293 24 119 WRKY Transcription Factor Family AT2G34830 64.948 7.27e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g04293 WRKY 5.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04293 - - gmx:100127368 373.244