Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04291 ATGTTAAACAAtcaacaacaagaacaagaatTTGAGGTTGTTGGTAACTTCATGTCATTAGAAGACTTAATCAACTTCAACCCTAGTCaacaaaataatcatcaaaacAAAGTTTTAATTCCAAAGCCTTTACAAAACAATATGCAGAAGATGCCAATGCCGTTGTGTTTGTCGTCTTTAGAGATTCTGAGAAATCATGGAAGCAGATTCAACAAGAAAAACATAGTCACTAAAAGTTCTTCAAATTTGGAACATCATCAAATGATGTCAACAGAAGAAATAATAAGAGTAGCTGGAGCAAGGTATACTCAATACTCTTCATCTCATTGGAGTGAAAATTCTTGCatccaaacacacccttatggATTTGATCTACATGGTTTAACTGAAGAACAAAATAGAGACATTGAACTTGCACAGTTTCTATTTTCAGCAGCTGAAAGAGTAAGTTTTCAACAATTTGAACGtgcaaaaaaattacttttttattgtCAATGGAATTCATCTATCACAGGAAACTCTGTTCAAagaattgtttttcatttttcacaaGCACTTcaagaaagaatagagaaagaaacaGGAAGAGTGATTAAAGGGTcagagaaaaatgaagaaaatgagtTAATTCAGAATATGGATCCAAAAAAAGCACTTTCTTGTCATCAAAAAATTCCTTTTAATCAAGTTATGCAATTCACTGGTATACAAGCTATAGTTGAACATGTTATGTTTGAGACTAAGATTCATCTTATAGATCTTAATATAAAAAGTGGAGTTCAGTGTATAACTTTGATGCAAGCTTTAGCTGATAGAAAAGATTGCATGGTTGAGAGTTTTAAGGTAACTGCTATTGGAGTCAATTCATGCAAGGATAAGATTGAAGAAACTGGTAAAAACTTAGCTAGTTTTGCGGTATCGTTGAACTTACCCTTTTTATTTAAGGCTGTTTTAGTAGAAGATATGTtggaaattaaagaaaatgatttcgaAATCGAAGAGGATGAAGCTGTTGCGGTATACTCTCCGTATTTTCTAAGGACTTTGATATCAAAGCAAGATAGTATGGAAAATTTGATGAGGGTTATAAGGTATATCAAACCATCTATAATGATTGTTCTTGAAATTGAAGCAAGTCTTAATTCGCCGTCTTTTGTGAACCGGTTTGTGGAAGCATTGTTTCATTACTCGGCTTTTTTCGATATACTTGAAACATGTATAAAAGAGGAGGATGAGTGTAGAATGATGACAGAAGGAATATTATCAGCAGGGATAAGAAATATTGTTGCAACAGAAGGTAGTGAAAGGAATGTTAGAAATGTGAGAATTGATGTTTGGAGAAAGTTTTTTGCAAGGTATAGAATGGTTGAAACTAGGTTTAGTGAGGCATGTAATTACCAAGCTGAATTAGTGGttaaaaagtttgattatggGAATTTTTGCAATGTGGAAAAAAATGGAAAGTGTTTAGTTTTGGGATGGAAAGGGACTCCAATGCATTCAATCTCAGCTTGGAGGTTTCTTTGA 1527 0.296 MLNNQQQEQEFEVVGNFMSLEDLINFNPSQQNNHQNKVLIPKPLQNNMQKMPMPLCLSSLEILRNHGSRFNKKNIVTKSSSNLEHHQMMSTEEIIRVAGARYTQYSSSHWSENSCIQTHPYGFDLHGLTEEQNRDIELAQFLFSAAERVSFQQFERAKKLLFYCQWNSSITGNSVQRIVFHFSQALQERIEKETGRVIKGSEKNEENELIQNMDPKKALSCHQKIPFNQVMQFTGIQAIVEHVMFETKIHLIDLNIKSGVQCITLMQALADRKDCMVESFKVTAIGVNSCKDKIEETGKNLASFAVSLNLPFLFKAVLVEDMLEIKENDFEIEEDEAVAVYSPYFLRTLISKQDSMENLMRVIRYIKPSIMIVLEIEASLNSPSFVNRFVEALFHYSAFFDILETCIKEEDECRMMTEGILSAGIRNIVATEGSERNVRNVRIDVWRKFFARYRMVETRFSEACNYQAELVVKKFDYGNFCNVEKNGKCLVLGWKGTPMHSISAWRFL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04291 508 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 506 IPR005202 -
Tsu07g04291 508 ProSiteProfiles GRAS family profile. 129 506 IPR005202 -
Tsu07g04291 508 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 4 506 - -
Tsu07g04291 508 Pfam GRAS domain family 139 506 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04291 Tsu-Chr7 48338800 48340326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04291 128 507 GRAS Transcription Factor Family AT3G03450 29.974 7.51e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu07g04291 GRAS 1.5e-81 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04291 - - gmx:100791952 612.068