Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04290 ATGGTCTCAAATTCTCCAGGCTCTGCCATTGGATCTCAAGAGAAACATGGAGGGGGATCATCAAACACTCGTCAAAATTTGGGGAACAAGATAAATCTGTTGAAAAAGCAAATCCAAAAGGAACGAGTTGAATCGATTAAAGAAAAGATTCAGAGAAATGGGAAGAATCTCAAATGTCAACTCTCTGAGCTCATGTTAGTTATATCAAGAAATAAATCATTAGAAAGTGAGGAAAGTACTCTTAATATGCTTTCTTCAAGAATGAATCATCCTCAGTGTAAGTTCAATAGTTGCATCCCTCGAGTTCCGGTAGAGGGTGACCAAATCAACAATCCAGATGCACCATTAGTGAAAAGTATAAAGATGACATACATCAAAAGATTACCTCCATTTACATTTTGGACAAATTTAACCAGAAATGAATTAATGACTGAAGATCAATCTGTTTTTAGAACAAGATATATAAATTATGATCATCATGGAGGTGAAACATTAATAACCAATATCAGTGATACTGAGGAAGAGCCAAAAGAGCATAAGGAAGTTAAAGGCGACTTTTCTGAGGGTGAAGACAGATTTCTAAGGATGGTATTCGAAGAACATGGTTTAACTGAGGAGGTTTCGAGCATTGTTAGCGATGTTATCGGAGGTACCAGTTCAGAAATTCGGGAGAGATATGAACATATCAAGGAAAAGGAACAAAATTCTGAAGATTATGGAAAAAGCCGATCAAACACTGAGATATGTTTGAACAAAAGTTTGAGCGTAACTTTAGATGGTTTTGATCACCTTCTATGTCGCCAGTGCATGATCTTTGATTGTTCGTTGCACGGATGCTCTCAAAAGTTTATATATCCAAATGAAAAGCAAGAAGTTTGGTCAGAACCAGAAGGCGACAGAAAACCATGTAGTGATTATTGTCACCTTAATGACAAAGAGGCTACAATTAATGATTCTATGAGGGACCTAAATTTGGATGCTGCTTGCAATGAAGAACAACATGTCATGGATGAAACAGAATTGAATCAAATGTCTAACTCAATGGAAGGACAAATTGAGAAGGATTCTAGTGTTTCAAATTGGAAGCCTTTGGAGAAAGAATTATATCTGAAGGGAATAGAAATGTTTGGGAGAAACAGTTGCCTTATATCTCGGAACTTACTTGCCGGATTGAGGACTTGCAAGGAAGTTGCTAGATACATGGATGCTGAAGCGTCAAGGCCACATGGATCCATGGGCGAAAATGGAAGATTTGATGCAATGTCCACTGACAATAAGACGCCATCAAGGCCGCGGAAGGCGCCAAGAAAGAACAAAGCTAAGAAGTTCTCTTCAAAATCCGCAGGACTTCCGTCTACATGGAAACAAGTTACTGAAGGGGggaatagaaaaaaatataaacagtATACACCTTGTGAATGTAAAGGAACGTGTGGAAAAGAATGTTCATGTCTTGTTAATGGATATTTCTGCGAAAAATATTGCGGGTGTTCAATGCTTTGTAGAAATAGATTTGGAGGATGTCATTGTAATAAGACTCATTGTAGAAGTAGGCATTGTCCATGCTTTGCAGCATTAAGAGAATGTGACCCTGATGTATGTAAAAATTGTTGGGTTAGTTGTGGTGATGGTTCATTAGGAGAGTCATCTCATCGTGCAGAGGGTCAATGTGAAAATATGATGTTGCTTTTAGGGAGAAAAAAACATAAGATTCTTTGGGGAAGGTCTGATATTACTGGATGGGGAGCATTCTTAAAGAATCCTgcaaacaaaaatgattttctagGAGAATACACGGGTGAACTAGTCTGTCACGAAGAAGCTGAGAAACGTGGAAAGTTTTATGATGATACAggcttttcttcttttcttttcaacttGAATGATACGtATTGTCTTGATGCTTTTCGCAAAGGAAACAAGTTGAAATTTGCAAACCACTCATTAAAACCCAATTGCTATGCAAAGgCTATGCTTGTTGGTGGGGACCATCGAGTTGGAATATATGCAATGGAAGACATTAAAGCTGGTGAGGAGCTTCTCTATCATTACCACTATGATGAGGATCATCAGCAACCAGCATGGCTTGTTAAGCTTTTAGGTGATGCTtccaataaaaataatgatCCAACATATTCTCAAGGAAAAGGCAAAAAACACCAGTCTCATTGA 2172 0.3679 MVSNSPGSAIGSQEKHGGGSSNTRQNLGNKINLLKKQIQKERVESIKEKIQRNGKNLKCQLSELMLVISRNKSLESEESTLNMLSSRMNHPQCKFNSCIPRVPVEGDQINNPDAPLVKSIKMTYIKRLPPFTFWTNLTRNELMTEDQSVFRTRYINYDHHGGETLITNISDTEEEPKEHKEVKGDFSEGEDRFLRMVFEEHGLTEEVSSIVSDVIGGTSSEIRERYEHIKEKEQNSEDYGKSRSNTEICLNKSLSVTLDGFDHLLCRQCMIFDCSLHGCSQKFIYPNEKQEVWSEPEGDRKPCSDYCHLNDKEATINDSMRDLNLDAACNEEQHVMDETELNQMSNSMEGQIEKDSSVSNWKPLEKELYLKGIEMFGRNSCLISRNLLAGLRTCKEVARYMDAEASRPHGSMGENGRFDAMSTDNKTPSRPRKAPRKNKAKKFSSKSAGLPSTWKQVTEGGNRKKYKQYTPCECKGTCGKECSCLVNGYFCEKYCGCSMLCRNRFGGCHCNKTHCRSRHCPCFAALRECDPDVCKNCWVSCGDGSLGESSHRAEGQCENMMLLLGRKKHKILWGRSDITGWGAFLKNPANKNDFLGEYTGELVCHEEAEKRGKFYDDTGFSSFLFNLNDTYCLDAFRKGNKLKFANHSLKPNCYAKAMLVGGDHRVGIYAMEDIKAGEELLYHYHYDEDHQQPAWLVKLLGDASNKNNDPTYSQGKGKKHQSH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04290 723 Pfam CXC domain 507 538 IPR041355 -
Tsu07g04290 723 Gene3D SET domain 469 687 IPR046341 -
Tsu07g04290 723 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 18 336 - -
Tsu07g04290 723 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 337 721 - -
Tsu07g04290 723 ProSiteProfiles SET domain profile. 569 685 IPR001214 GO:0005515
Tsu07g04290 723 Coils Coil 24 44 - -
Tsu07g04290 723 CDD SET_EZH 569 686 - -
Tsu07g04290 723 MobiDBLite consensus disorder prediction 1 28 - -
Tsu07g04290 723 SUPERFAMILY SET domain 464 690 IPR046341 -
Tsu07g04290 723 ProSiteProfiles CXC domain profile. 440 554 IPR026489 -
Tsu07g04290 723 Pfam SET domain 580 684 IPR001214 GO:0005515
Tsu07g04290 723 SMART CXC_2 508 540 IPR033467 -
Tsu07g04290 723 SMART CXC_2 467 507 IPR033467 -
Tsu07g04290 723 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 18 336 IPR045318 GO:0006338|GO:0018024
Tsu07g04290 723 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 337 721 IPR045318 GO:0006338|GO:0018024
Tsu07g04290 723 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 13 723 IPR025778 GO:0031519
Tsu07g04290 723 SMART set_7 569 691 IPR001214 GO:0005515
Tsu07g04290 723 SMART sant 182 232 IPR001005 -
Tsu07g04290 723 SMART sant 357 407 IPR001005 -
Tsu07g04290 723 MobiDBLite consensus disorder prediction 405 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04290 Tsu-Chr7 48330787 48336018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04290 557 684 C2H2 Transcription Factor Family AT2G23740 32.414 1.20e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu07g04290 SET 2.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04290 - K11430 mtr:MTR_7g109560 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04290 07 48330787 48336018 Tsu01g03735 01 45083205 45092505 PCT