Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04272 ATGGCGCATCGAAGAGCCAAATTACTGTTCCTTCTCTGCGCTATTTGTTATTCTCTCAATGCCATTGCCGCAAAGAGCTATTATGATATACTTCAAGTGTCAAAAGGTGCATCGGATGATCAGATTAAGAGAGCGTATAGGAAGCTTGCATTGAAGTATCATCCTGATAAGAATCAGGGAAATGAAGAAGCTAATAAGAAATTTGCCGAGATTAACAATGCTTATGAAGTATTGTCGGATAACGAGAAGAGAAATATTTACGATAAGTATGGTGAAGAGGGATTGAAGCAGCATGCTGCTGGTGGAGGAAGAGGAGGTGGAATGAACATGCAGGATATTTTTAACTCTTTCTTTGGTGGGGGATCAATGGAGGAAGAGGAGAAAATTGTAAAAGGTGATGATGTTATTGTTGATTTGGATGCAACCCTTGAAGATTTGTACATGGGTGGTTCCTTGAAGGTTTGGAGGGAGAAAAATGTTGTAAAGCCAGCACCTGGAAAAAGACGCTGTAACTGTAGAAATGAGGTTTATCACAGGCAAATTGGGCCTGGGATGTTTCAACAGATGACAGAGCAGGTCTGTGACCAATGTGCTAATGTCAAATACGTAAGGGAGGGATATTTCGTAACTGTTGATATTGAGAAAGGCATGCAAGATGGCCAGGAGGTGCTATTTTATGAGGATGGTGAGCCCATAATTGATGGAGAATCTGGAGATTTAAGGTTTCGTATCCGTACCGCACCTCATGAACTTTTCAGAAGGGAAGGCAATGACTTACATACCACTGTCACTATAACCCTGGTTCAAGCCCTTGTTGGTTTTGAGAAGACCATTAAACACCTTGATGAACATCTAGTGGACATAAGCGCCAAGGTGAGCATGAAATATCCTCTTTGCAGATCTTAA 906 0.4139 MAHRRAKLLFLLCAICYSLNAIAAKSYYDILQVSKGASDDQIKRAYRKLALKYHPDKNQGNEEANKKFAEINNAYEVLSDNEKRNIYDKYGEEGLKQHAAGGGRGGGMNMQDIFNSFFGGGSMEEEEKIVKGDDVIVDLDATLEDLYMGGSLKVWREKNVVKPAPGKRRCNCRNEVYHRQIGPGMFQQMTEQVCDQCANVKYVREGYFVTVDIEKGMQDGQEVLFYEDGEPIIDGESGDLRFRIRTAPHELFRREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISAKVSMKYPLCRS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04272 301 Coils Coil 61 81 - -
Tsu07g04272 301 Pfam DnaJ domain 27 88 IPR001623 -
Tsu07g04272 301 PRINTS DnaJ domain signature 46 61 IPR001623 -
Tsu07g04272 301 PRINTS DnaJ domain signature 63 83 IPR001623 -
Tsu07g04272 301 PRINTS DnaJ domain signature 83 102 IPR001623 -
Tsu07g04272 301 PRINTS DnaJ domain signature 28 46 IPR001623 -
Tsu07g04272 301 SUPERFAMILY HSP40/DnaJ peptide-binding domain 130 253 IPR008971 GO:0006457|GO:0051082
Tsu07g04272 301 CDD DnaJ 27 80 IPR001623 -
Tsu07g04272 301 Gene3D DnaJ domain 23 126 IPR036869 -
Tsu07g04272 301 Pfam DnaJ C terminal domain 137 284 IPR002939 -
Tsu07g04272 301 PANTHER BNAA09G39960D PROTEIN 8 293 - -
Tsu07g04272 301 Gene3D - 249 298 - -
Tsu07g04272 301 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Tsu07g04272 301 SUPERFAMILY Chaperone J-domain 22 122 IPR036869 -
Tsu07g04272 301 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 293 IPR044713 GO:0006457|GO:0030544
Tsu07g04272 301 CDD DnaJ_C 133 285 - -
Tsu07g04272 301 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Tsu07g04272 301 SUPERFAMILY HSP40/DnaJ peptide-binding domain 252 289 IPR008971 GO:0006457|GO:0051082
Tsu07g04272 301 Gene3D - 127 248 - -
Tsu07g04272 301 SMART dnaj_3 25 83 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04272 Tsu-Chr7 48179290 48183609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04272 27 90 C2H2 Transcription Factor Family AT1G74250 43.478 6.76e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04272 K09517 - gmx:100799701 535.028