Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04261 atggCAACCAGAAATCGAACTCTAGAATTCAGAAAGTACAGAGACACAGTCAAAAGCTTACGCACTCCACTTTCTTCATCAGCTTCTGCTTCTTCCGGTGGTCCTGTCATTGAAATGGTTAACACTTCACTTCTCCGTTCCAAGAATCGATCTTCTTATACTCCTCTTAGTACCCAAGACTCAGGTCCATCTTCCTCAagTGATGCATTTACTGTGGGTTTGCCGCCATCTTGGGTGGATGATTCTGAAGAAATAGCTACAAATATACAACGTGCAAAGGTTAAAATGTCTGAGTTAACCAAAGCTCATGCAAAGGCTTTAATGCCTTCCTTTGGTGATGGTAAAGATGATCAGCATCAGATTGAGACTCTCACCCGGGAAATAACGGCTCTCCTCAGAAAGTCTGAAGTGAGACTAAAAAAACTTTCTGCTGGTAGAGGATCTGCTGAGGAATCTAATGTCAAGAAAAATGTGCAGCGTTCGCTTGCTACAGACCTTCAGAACTTGTCAATGGACCTGCGGCGGAAGCAGTCAGCATATTTGAAACGTTTGCAGCAGCAACAAGAGGGTTATGATGGGATTGACTTGGAGATGAACTTTAACGGGAGTAAATCTGGATTGCAGGACGATGGATTCGATGATGTGGGTTTTAGTGAAGTGCAGTTGACAAAGCTAAAGAAAAATGAGCAGATTTCAGcggaaagagaaagagaaattgatCAGGTCGCTAAATCAGTCCAGGACCTTGCTCAAATCATGAAGGATCTCTCCGTCCTTGTGATAGACCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAGAGTGTTGCTACAACTGTTGAGGAGGGCTTTAAGCAGTTGCAAAAGGCAGAAAGAACTCAGAAAAAAGGAGGGATGATTACATGTGCAACAGTGCTTGTTATCATGTGCTTTGTCATGCTAATTCTGTTGATAATCAAGGAGATTATCCTCTAG 978 0.4141 MATRNRTLEFRKYRDTVKSLRTPLSSSASASSGGPVIEMVNTSLLRSKNRSSYTPLSTQDSGPSSSSDAFTVGLPPSWVDDSEEIATNIQRAKVKMSELTKAHAKALMPSFGDGKDDQHQIETLTREITALLRKSEVRLKKLSAGRGSAEESNVKKNVQRSLATDLQNLSMDLRRKQSAYLKRLQQQQEGYDGIDLEMNFNGSKSGLQDDGFDDVGFSEVQLTKLKKNEQISAEREREIDQVAKSVQDLAQIMKDLSVLVIDQGTIVDRIDYNIQSVATTVEEGFKQLQKAERTQKKGGMITCATVLVIMCFVMLILLIIKEIIL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04261 325 Gene3D - 75 283 - -
Tsu07g04261 325 SMART tSNARE_6 224 291 IPR000727 -
Tsu07g04261 325 ProSitePatterns Syntaxin / epimorphin family signature. 235 274 IPR006012 GO:0005484|GO:0006886|GO:0016020
Tsu07g04261 325 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 320 - -
Tsu07g04261 325 Pfam SNARE domain 265 317 IPR000727 -
Tsu07g04261 325 PANTHER SYNTAXIN 1 320 IPR045242 -
Tsu07g04261 325 SMART SynN_4 69 185 IPR006011 GO:0016020
Tsu07g04261 325 SUPERFAMILY t-snare proteins 74 284 IPR010989 GO:0016020|GO:0016192
Tsu07g04261 325 MobiDBLite consensus disorder prediction 48 71 - -
Tsu07g04261 325 CDD SNARE_syntaxin16 233 290 - -
Tsu07g04261 325 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 229 291 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04261 Tsu-Chr7 48081802 48086769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04261 1 325 SNARE and Associated Proteins AT4G02195 66.258 6.39e-155 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04261 K08489 - gmx:100803629 473.781