Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04258 GTTTATTTTACTATGTATGAGCAGTTCAAAAGCCTTCTTCATTCTGATGATGAAAGCCATCACCTTTCAGTTGGAGCTAATATGGTAGCTGCCGCTGGTGCTGGAGCTTCAACTACCTTGTTTACAAATCCGCTTTGGGTTGTCAAGACTAGACTTCAAACTCAAGGAATGAGACCTGGTGTTGTGCCATATAAGAGCACACTATCTGCATTGAGGAGAATTGCGCATGAGGAGGGCATACGGGGGCTGTACAGTGGCCTTGTACCTGCTCTAGCTGGTATCAGTCATGTTGCCATTCAATTCCCGATGTatgaaacaataaaattttatttagcaAATCAAGATGACGCGGCAGTAGATAAACTTGGTGCACGTGATGTTGCTATTGCTTCATCAGTATCCAAACTTTTTGCATCCACGTTGACATATCCCCATGAGGTTGTACGTTCCAGATTGCAAGAACAAGGGCATCACTCAGAGAAACGATACTCTGGACTTGAACTCTGGACGCTCCTTAATAATATCCCTCTTCAGCTCCTCAGTGTGGCAGAGCCAGAAATTTTATGGAGTCTAGAAGCTTCATTATCTTTTTCAGTTGCATCTGTTGTTGAAGATGTGCTTCAACAACACGGTCATCGTCTCAAACATCTTGATTTTGATTCTAGAATAGCACAACAAGCTGCATCTAGAAGATATGAAGCGGCAGGGTGGTTAAGAAAAATGGCTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCATCTGAGGAAGAATTTAGGCTTGGTTTAAGAAGTGGGATTATCTTATGTAATGTTATTAATAAGGTTCAATCTGGTGCTGTTCCTAAGgttgTGGAGAGTCCTGTTGATTCTGCAATGATCCCTGATGGAGCACCATTATCAGCAtatcaatattttgaaaatgtcaGGAATTTTCTTGTGGCTGTACAAGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAACTGCATCTTAGCCCTTAAATCCTATGGTGAGTGGAAACAGAATGGGGCAAATGGTGTGTGGAAATTTGGTGGAAATCTCAAACCTACTATCTCTTCAAAATCTTTTGTTGTGAGGAAAAACTCAGAACCATTTACTAATTCCTTGTCAAGGACCTCATCGATCAATGAAAAAACTCTGGCTACTCTTAGTTCTGATTTTGAGTCTGATAAAATGTCTGGTTCCCATTCTTTGAGTATGCTTGTTCGTTCTATTCTGTCAGATAAGAACCCAGAAGAAATTCCAATGTTGGTTGAATCTGTTTTGAACAAGGTTGTAGAGGAGTTTGAACATCGAATTGCAAGCCAAGGTGAACAGACAAAAATAACTTTAAGAGATCATGTTTCTGAAAGGAATGGATCCGCGTCAAAGTTTGTTGTGGCAGATAAAAAGGTGGAGAGCAAGATTCATATGGTAGCTAAGAAAGAGGTTCACATTGATAAAAATTGTGTGGCTGCTGAGGAATTGCAACGCCAACACCTGAAGCAGCAAATGCTCTTTGACCAACAGCGAAGAGACATTCAAgAGCTAAAGCTCACTCTTCACACCACAAAAGCTGGGATGCAGTTCATGCAAATGAAATTTCATGACGAGTTTTCCAATCTTGGAATGCACGTTCATGGCTTAGCTCATGCGGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATGAAGTCCAAGATCTAAAGGGAAGTATTAGGGTATACTGTCGAGTAAGACCCTTCTTTCCTGGACAACCAAACCAATTGAGCGCAGTAGAAAATATAGAAGATGGAACTATCACAGTTAGTATTCCTTCAAGAAATGGGAAGGGACAAAGATCCTTCAACTTTAACAAAGTCTTTGGACCATCTGCTACCCAAGCGGAGGTCTTCCTTGATATGCAACCACTTATTAAATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGTCAAACAGGATCTGGAAAAACTTACACAATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTTTAAGCGATTTGTTTTTTATAGCAGATCAAAGAAAGGACACTTTCCACTATGATGTTTATGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGGGATCTATTGGTCACTGATGGAACAAACAAAAGATATCCTTTCATCAAAATTCGTAGTAGCTCTCATAAAGGACTCAGTGTGCCAGATGCAAGCCTTATCCCTGTGTCGTCAACTATTGATGTTATTGAACTAATGAACCTTGGCCACAGGAACCGTGCTGTTGGAGCAACAGCCCTTAACGACCGCAGTAGCCGATCTCATAGTTGCTTGACAGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTACCATCCGCGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGAGTAGATAAATCTGAGGCCACTGGAGATAGACTAAAAGAGGCACAGCATATTAACAAATCTCTATCAGCTTTGGGTGATGTCATTGCTTCGCTTGCTCAGAAAAACTCACATGTACCTTATAGAAATAGTAAACTCACACAATTGCTCCAAGATTCACTTGGAGGACAGGCTAAAACACTGATGTTTGTTCACATAAGTCCTGAAAGTGATGCAATTGGAGAAACAATTAGTACTTTAAAATTTGCCGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATGGTGCAAATGTTAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAGGCAGCACTGGGAAGAAAAGAAGGGGAATCAGAACATTCTTTTACCGGAAGCTCCGAAAAATATAGGACAAAGGCTAGTGAGCTATCCCCTTATCACATAAACCAGCGGGTTGCAGACACTGGTGATCAGCTTAGATGCCGGCGACCAATGGTTGAAGTTGGCAATATCGAGCTTCAGAGTAAAGCTGTAATGAGGCAGAAAACTCAAAGCATTGACTTTGATGAGATATCAGCAAATTCACCACCCTGGCCCCCAGTAAATAGTCTTGTGCAAAACGATGTGGAGGACGACAAAGAAACAGGTTCTGGAGAGTGGGTTGATAAGGTAATGGTAAACAAGCTAGATGCAAACAAAACTGAGAACCTCTTGGAGTGTTGGCAAGAAAGCAACGGAAACTTATCTGAATCCTTTTATCAGACATATCTCCAAGATTCTTCCAAAATGTACTCAGAACAGTCCTATAACAATATGTTCATGGGAGGTAACCAGTTTAGTAGCATTATGACGGGTTCAGATGACAACATGGACGAGGTTGATGCTGCAACCAGTGATTCCTCAGAACCTGATTTGCTTTGGCAATTTAATCATTCTAAACTTACCAGTTTGACTAATGGAATTGGATCAAAGACTATTATGAGATCTGTCTCAAAGGCAACAAAAAGTCCAGAATTGAGCAAGAGTTCTGTTCATTCTTCTCTTGGTCCTTCTCCTTCGTTCAAACAATCCAAAGTTGTCTCACATAGGACAGGAAGAAGTCCAGCTCCTATTGACATGAAACGTAAAACTGGGAGTAGAAAGTAA 3624 0.4045 VYFTMYEQFKSLLHSDDESHHLSVGANMVAAAGAGASTTLFTNPLWVVKTRLQTQGMRPGVVPYKSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPMYETIKFYLANQDDAAVDKLGARDVAIASSVSKLFASTLTYPHEVVRSRLQEQGHHSEKRYSGLELWTLLNNIPLQLLSVAEPEILWSLEASLSFSVASVVEDVLQQHGHRLKHLDFDSRIAQQAASRRYEAAGWLRKMAGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSAMIPDGAPLSAYQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSSRIVNCILALKSYGEWKQNGANGVWKFGGNLKPTISSKSFVVRKNSEPFTNSLSRTSSINEKTLATLSSDFESDKMSGSHSLSMLVRSILSDKNPEEIPMLVESVLNKVVEEFEHRIASQGEQTKITLRDHVSERNGSASKFVVADKKVESKIHMVAKKEVHIDKNCVAAEELQRQHLKQQMLFDQQRRDIQELKLTLHTTKAGMQFMQMKFHDEFSNLGMHVHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFFPGQPNQLSAVENIEDGTITVSIPSRNGKGQRSFNFNKVFGPSATQAEVFLDMQPLIKSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFFIADQRKDTFHYDVYVQMIEIYNEQVRDLLVTDGTNKRYPFIKIRSSSHKGLSVPDASLIPVSSTIDVIELMNLGHRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGATIRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAARVNKDGANVKELKEQIASLKAALGRKEGESEHSFTGSSEKYRTKASELSPYHINQRVADTGDQLRCRRPMVEVGNIELQSKAVMRQKTQSIDFDEISANSPPWPPVNSLVQNDVEDDKETGSGEWVDKVMVNKLDANKTENLLECWQESNGNLSESFYQTYLQDSSKMYSEQSYNNMFMGGNQFSSIMTGSDDNMDEVDAATSDSSEPDLLWQFNHSKLTSLTNGIGSKTIMRSVSKATKSPELSKSSVHSSLGPSPSFKQSKVVSHRTGRSPAPIDMKRKTGSRK 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04258 1207 Gene3D - 220 350 IPR036872 -
Tsu07g04258 1207 MobiDBLite consensus disorder prediction 1158 1189 - -
Tsu07g04258 1207 PRINTS Kinesin heavy chain signature 786 803 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04258 1207 PRINTS Kinesin heavy chain signature 817 835 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04258 1207 PRINTS Kinesin heavy chain signature 866 887 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04258 1207 PRINTS Kinesin heavy chain signature 661 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04258 1207 Pfam Calponin homology (CH) domain 230 350 IPR001715 GO:0005515
Tsu07g04258 1207 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 192 1204 - -
Tsu07g04258 1207 Pfam Mitochondrial carrier protein 22 113 IPR018108 -
Tsu07g04258 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 588 948 IPR027417 -
Tsu07g04258 1207 Pfam Kinesin motor domain 594 915 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04258 1207 SMART kinesin_4 586 924 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu07g04258 1207 ProSiteProfiles Calponin homology (CH) domain profile. 228 350 IPR001715 GO:0005515
Tsu07g04258 1207 Gene3D Mitochondrial carrier domain 1 204 IPR023395 -
Tsu07g04258 1207 PANTHER KINESIN-LIKE PROTEIN KLP-3 192 1204 - -
Tsu07g04258 1207 MobiDBLite consensus disorder prediction 1158 1207 - -
Tsu07g04258 1207 Coils Coil 923 950 - -
Tsu07g04258 1207 SUPERFAMILY Mitochondrial carrier 1 163 IPR023395 -
Tsu07g04258 1207 CDD KISc_C_terminal 586 918 - -
Tsu07g04258 1207 Gene3D Kinesin motor domain 583 957 IPR036961 -
Tsu07g04258 1207 SUPERFAMILY Calponin-homology domain, CH-domain 230 361 IPR036872 -
Tsu07g04258 1207 SMART ch_5 230 348 IPR001715 GO:0005515
Tsu07g04258 1207 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 110 IPR018108 -
Tsu07g04258 1207 ProSiteProfiles Kinesin motor domain profile. 588 916 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04258 Tsu-Chr7 48055374 48069699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04258 1 167 Chloroplast and Mitochondria Gene Families AT2G47490 78.443 5.59e-78 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04258 K10406 - gmx:100795476 1638.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04258 07 48055374 48069699 Tsu01g03774 01 45468536 45475067 PCT