Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04233 ATGATCATAACATTACGCCTTATTTTACTAGCCATATTTCTTTCACTCTCAACAAATACTAGCCAAATTGTATATGCAAAAAGAAACTACAACAATAATGTTAAGGAAGCTTGTAGTGTCACAAGGTACAAAAATCTTTGCATCCACACACTATCACAATTCTCCAACACACCAGGAAGAACCCCAAGCAAATGGGCACGCGCGGGAGTGTCAGTAACAATAGGCGAAGTTAAGATTGTTCAAACATATCTTACAAAATTAAAGAGCAATGGGAATTTGAAAGGAAGAAACAAAGTCGCGCTTTCGGATTGTATAGAAACTTTTGGTTATGCACTTGATGATCTTCATAAATCACTCGGTGTGCTTAGGAAGCTAAGCAAACATACATTTAGTACACAAATGGGGGATCTTAATACATGGATTAGCGCGGCTCTTACCGATGCAGATACTTGTCTTGATGGATTTGAAGGAAAAAGTGGAAAGCAAATTAAATTGCTGCAAAATAAGGTTCATAATGTTTCTTACCTAACAAGCAATGCTCTTGCTCTTGTCAACAAACTTGCTTCTACAGGTCTCAGAAAGCATCATTGA 591 0.3723 MIITLRLILLAIFLSLSTNTSQIVYAKRNYNNNVKEACSVTRYKNLCIHTLSQFSNTPGRTPSKWARAGVSVTIGEVKIVQTYLTKLKSNGNLKGRNKVALSDCIETFGYALDDLHKSLGVLRKLSKHTFSTQMGDLNTWISAALTDADTCLDGFEGKSGKQIKLLQNKVHNVSYLTSNALALVNKLASTGLRKHH 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04233 196 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Tsu07g04233 196 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 12 182 - -
Tsu07g04233 196 SMART PMEI_2 29 183 IPR006501 GO:0004857
Tsu07g04233 196 CDD PMEI-like_3 37 189 - -
Tsu07g04233 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 188 IPR035513 -
Tsu07g04233 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 182 - -
Tsu07g04233 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 189 IPR035513 -
Tsu07g04233 196 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04233 Tsu-Chr7 47867585 47868610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04233 34 192 Carbohydrate Esterase AT3G14310 34.940 4.25e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04233 - - gmx:100791264 262.307