Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04205 ATGATGGAGCTCTGGAACGACGGTTTATCGGAGCTGGAGATTGGGAGTTCCGTCGAGTCATTGCACAAGTTTTTAGGTTCTCAAAGAGAACTCTTACATAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACACAATGCAAACTCACCGGTGTCAATCCTCTTTCTCAAGAAATGGCTGCCGGTGCTTTGTCAATAAAAATCGGAAAAAGACCTAGGGATTTATTAAATCCAAAGGCTGTAAATTACATGCAATCAGTTTTTTCTATTAAAGATGCAATTAGCAAGAAAGAATCTCGCGAGATCAGTGCTTTATTTGGTGTAACAGTAACACAGGTGCGCGACTATTTCACTAGTCAACGTTCAAGGGTGAGGAAACAAGTTCAGTTGTCGAAGGAGAGGGCATTGAAATCTAATTCTTGTGCAGAATCTCTTGATGTGCAAATAAACTCGGATCCCGTGAGATCAATGAATCCAGCTCCCTTAAACTCTGTTGGTGCCACCAACGTGGAAGAAGCATCCTATTCCACACAGGAAGCAGCTCTTTCTGACCTAGATGACTCAGATAAACAATTTGTTGAGAACATTTTTGGTCTAATGCAGAAAGAGGAAACATTTTGTGGACAGGAGAAATTGTTGGAGTGGATATTGACAATACATAATTTTTCGGTCTTGTTGTGGTTTTTGACCGGAGGAGGTGCAATGACTTTAGCAAATTGGTTGAGTAAAGCCGCCGTTGAAGAGCAAACGAGTGTGCTGCTTCTTGTCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCCTTCCTGCTCATATATCAGCTTTATTGCAGAGTGTTAATAGACTGCGGTTCTACAGGACATCAgACATATCTAACAGGGCAAGGGTTTTGTTATCAAAGTGGAGCAAATTGTTAACAAGGAACCAAGCCATAAAGAAACCCAATGGTGTTAAGCTTTCCGGTGATGGTCGGAAAGAGACAATACTTTCTCAGAGcaTTGGTCAAACCATCAGCCCTGAATCATGGCATTTTGATGTTCCTGAAGACATTCTTGCTCTCACGAATGAATTTTCAGATGATTTCAGGAAACCAGAATCTCATTCTGTGAAATTGTTACTACCCAGCTCAGATGATTGTAATAAGAAACACCCCCTTGGTGTATCTTCATCTCAATCTAGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGATTGGGGAGTAGAAGCCCACAGACGGCAAGGACAGGTCCGGTAAGTCAGGGCCGTCCTATGTCTGCCGATGATATCCAAAAAGCAAAAATGCGTGCATTATTTATGCAGAGTAAGTATGGGAAAACtgcttcaaaagaaaataaagccAAAATCAATAGTCCAAGTAAATCTCAGACAAAGCAGGCAAGTATTGCAGTTTGCTCTTCTAAAGTTCCAGTGCCACTCAAAAATGAAGAAGACAAGAAATCTCTGCTGCTTCCCTCTAAAACTACTAACAGGCCAGAAGCTTCTTATTCTAAACTGAAAATGGATTTGAAGGAACCTATCTGGGAGAAGTGCAAGAGGGTGAAAATACCCTGGAAAACACCAGCAGaagtAGAACTTAAAGATACCTGGAGAGTTGGTGCTGGTGAAAATAGCAAAGAGGTTCATGTTCAGGAAAACAGAAACCACAGGGACAAAGAATCCATTTATCGGACAGTACAAGAGATGCCCCCTAACCCCAAGGAGCCTTGGGATATCGAAATGGACTATGACGACTCTTTGACACTGGAAATTCCTATTGAACAGCTACCGGATGGTGATGGCCCAGAAATAGAAGATGCATCAGATCATGTTGAAACTCATGCTGCAGCTGTTCAAGGTGTGGCCTCCTCATCTTCAGCCAGTAATGCAGCCACTGCTGAACCTGATTTAGAGTTGCTTGCTGTACTGCTAAAAAATCCAGACTTGGTATTTGCCTTAACTTCTGGACAAGTTAGCAACGTATCAAATGATGAAACCTTGAAGCTGCTTGACATGATCAAGAGAGGCAGTGTAAATTTGGGATTAAGTGTAAATACAAATGGCAACCCTGGTCCCAGTGCAAAGGCCCCCGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACTCCTTCAAGAGATCCAACCACGAGTGGATACAGCATAGAAGCACCAAAGAATCCATTTACGCAGCAAAACTTAGCACATGATAGAAGAACTTTCCAGAGCTCTGCTTCAATTGCAACTACCAACTTATCATCTCAGATTCCAGCAACTAGCACTACAGTAAGACAACAACATACATTTGTTCCATTTTCGAAGCAGCTCAACGGCACAACAGCATCTCCGTATTCATTACCTCAGGCAACTAATATTATTCCTGAAAAACAACCACTTCGCTCCCATTCTTCCGTGTATGTACAATCACCATTCTCTGATAGAGGTTTAGCCATGAACACAATCACTGCAGATGTATCTCCAGCTGGCGCACATTCAACACATATAGCAATGCGGGCTGATGGCATAATTAACATCAAACCAGTAGTACCTAATTCTAGTATGCAACAAGAGGGTTTGTCTAATTCATTCCCACAATCCTTCACGTTGAGCTCACCAACAACATCACGCTCAGCCGCACAACAACTGATACATGCACATATGATGCCCAACCAGCCTCATTTCGTCGAACCTTTGTATCATAACCCTGCCCATCCCTATCAACCACAATTTGAAAAATCAGGTCCCATGTCAGATTTGCGGAGAGTTAGGCAGGATATGCCACCAAGTTATCATTCTCAGCAAAATCATAACAACTATAACGCAATGGTTGGGGGATCCATGCAATCTGGTTCGTGGGATAGAAACAATCATGAAAGGGAGGGATATGAATCATGGAGTCCGCACGATAGTCCAACTAGGAATCCTGGGTATGCTCCAGGTAGGAATCCCCCAGAGTCCAGAATGAACCATGTAAGAAATCATAGACCTGAATGGTCAAGGCAGCGGGGTTCTTCTGGACACTGGGACCGTGGTGGTAGGCATGAGAATAGAAAATGGCATGATCAGAGGCGGTGA 3072 0.4274 MMELWNDGLSELEIGSSVESLHKFLGSQRELLHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDYFTSQRSRVRKQVQLSKERALKSNSCAESLDVQINSDPVRSMNPAPLNSVGATNVEEASYSTQEAALSDLDDSDKQFVENIFGLMQKEETFCGQEKLLEWILTIHNFSVLLWFLTGGGAMTLANWLSKAAVEEQTSVLLLVLKVLCHLPLHKALPAHISALLQSVNRLRFYRTSDISNRARVLLSKWSKLLTRNQAIKKPNGVKLSGDGRKETILSQSIGQTISPESWHFDVPEDILALTNEFSDDFRKPESHSVKLLLPSSDDCNKKHPLGVSSSQSRERRKVQLVEQPGLGSRSPQTARTGPVSQGRPMSADDIQKAKMRALFMQSKYGKTASKENKAKINSPSKSQTKQASIAVCSSKVPVPLKNEEDKKSLLLPSKTTNRPEASYSKLKMDLKEPIWEKCKRVKIPWKTPAEVELKDTWRVGAGENSKEVHVQENRNHRDKESIYRTVQEMPPNPKEPWDIEMDYDDSLTLEIPIEQLPDGDGPEIEDASDHVETHAAAVQGVASSSSASNAATAEPDLELLAVLLKNPDLVFALTSGQVSNVSNDETLKLLDMIKRGSVNLGLSVNTNGNPGPSAKAPEKVEVSLPSPTPSRDPTTSGYSIEAPKNPFTQQNLAHDRRTFQSSASIATTNLSSQIPATSTTVRQQHTFVPFSKQLNGTTASPYSLPQATNIIPEKQPLRSHSSVYVQSPFSDRGLAMNTITADVSPAGAHSTHIAMRADGIINIKPVVPNSSMQQEGLSNSFPQSFTLSSPTTSRSAAQQLIHAHMMPNQPHFVEPLYHNPAHPYQPQFEKSGPMSDLRRVRQDMPPSYHSQQNHNNYNAMVGGSMQSGSWDRNNHEREGYESWSPHDSPTRNPGYAPGRNPPESRMNHVRNHRPEWSRQRGSSGHWDRGGRHENRKWHDQRR 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04205 1023 MobiDBLite consensus disorder prediction 373 428 - -
Tsu07g04205 1023 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 2 1023 - -
Tsu07g04205 1023 MobiDBLite consensus disorder prediction 708 727 - -
Tsu07g04205 1023 Gene3D - 69 137 - -
Tsu07g04205 1023 CDD homeodomain 70 127 IPR001356 GO:0003677
Tsu07g04205 1023 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 1023 - -
Tsu07g04205 1023 MobiDBLite consensus disorder prediction 685 727 - -
Tsu07g04205 1023 MobiDBLite consensus disorder prediction 446 470 - -
Tsu07g04205 1023 MobiDBLite consensus disorder prediction 899 1023 - -
Tsu07g04205 1023 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Tsu07g04205 1023 MobiDBLite consensus disorder prediction 406 421 - -
Tsu07g04205 1023 MobiDBLite consensus disorder prediction 444 470 - -
Tsu07g04205 1023 SMART HOX_1 69 131 IPR001356 GO:0003677
Tsu07g04205 1023 MobiDBLite consensus disorder prediction 926 951 - -
Tsu07g04205 1023 MobiDBLite consensus disorder prediction 986 1023 - -
Tsu07g04205 1023 SUPERFAMILY Homeodomain-like 70 131 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04205 11 732 Homeobox Transcription Factor Family AT4G02560 49.810 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04205 - - gmx:100806633 1366.29