Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04172 ATGAAGATGAAATTCTTCCTTGTAGCTTCAATGGTGCTTTTTTGTATCCTTGGGATTAGTGAAGGAGGAAGCCTAAGGAAGAATTTCTATAAGAAATCATGTCCTCAAGCTGAGCAGATTGTTAAGAACATAACCCAACAACATGTCTTTTCAAGGCCTGAGCTCCCAGCCAAGTTGCTAAGAATGCATTTTCATGATTGTTTTGTTAGGGGGTGTGATGGTTCTGTTTTGTTGGAGTCTACCGCAAGTAACACTGCAGAGAAAGATTCATTTCCTAATTTAACATTAGAAGGCTTTGATGTGATAAACGAAATAAAAGAAGCTGTGGAGGAAAAATGTCCTGAAACTGTTTCATGTGCTGATATAGTTGCATTGGCTGCTAGAGATGCTGTTTCTTTTAATAATGAACCAAAATGGGAAGTGCTTACTGGTAGAAGAGATGGTACTGTGTCCAAAAGCAGTGAAGCACTCATCAATATTCCATCACCTTTCCAAAACATCACCCAGCTCAGACAAATCTTTGCTAGTAAAAACCTTACTCTTCATGATTTGGTTGTTTTATCAGGAGCACACACTATTGGAGTAGGACATTGCAATTTGTTTAGCAGGAGACTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCATCTTTGAATCCAACTTATGCCAATTTCTTGAAGACTAAGTGTCAAGGTCTAAGTGACAGAACCACAACAGTAGAAATGGATCCAAATAGTTCAACCAACTTTGATGGAAATTATTATCCTATCCTTCTACAAAACAAAGGTCTCTTCACGTCAGATGCTACTCTTCTAACAACTAAGCAATCAAAAAACATTGTTAATGAATTGGTTTCACAGAACAAATTCTTCACTGAATTTGCACAGTCAATGCAAAGAATGGGAGCTATTGAGATTCTCTCAGGTTCAAATGGTGAAATCAGGAGGACATGCTctgttgttaattaa 969 0.3725 MKMKFFLVASMVLFCILGISEGGSLRKNFYKKSCPQAEQIVKNITQQHVFSRPELPAKLLRMHFHDCFVRGCDGSVLLESTASNTAEKDSFPNLTLEGFDVINEIKEAVEEKCPETVSCADIVALAARDAVSFNNEPKWEVLTGRRDGTVSKSSEALINIPSPFQNITQLRQIFASKNLTLHDLVVLSGAHTIGVGHCNLFSRRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDRTTTVEMDPNSSTNFDGNYYPILLQNKGLFTSDATLLTTKQSKNIVNELVSQNKFFTEFAQSMQRMGAIEILSGSNGEIRRTCSVVN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04172 322 PANTHER PEROXIDASE 4 321 - -
Tsu07g04172 322 ProSiteProfiles Plant heme peroxidase family profile. 24 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PANTHER PEROXIDASE 25-RELATED 4 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 SUPERFAMILY Heme-dependent peroxidases 25 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 Pfam Peroxidase 45 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Tsu07g04172 322 Gene3D Peroxidase, domain 2 161 301 - -
Tsu07g04172 322 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Tsu07g04172 322 Gene3D - 28 322 - -
Tsu07g04172 322 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g04172 322 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04172 Tsu-Chr7 47402718 47409893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04172 1 322 Peroxidase AT1G05260 52.615 8.61e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04172 K00430 - gsj:114405310 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04172 07 47402718 47409893 Tsu01g03847 01 46283770 46284996 PCT
Tsu01g01918 01 19250244 19254852 Tsu07g04172 07 47402718 47409893 PCT