Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04165 ATGGGTGCCATTGCCGATCCCACTCACGATCTCAACGACCAGATCTCTCAGCTCATGCAGTGCAAGCCTCTTTCCGAACAACAGGTTAAAGAATTATGTGAGAAGGCTAAGGAGATTTTAATGCATGAAAGTAATGTCCAGCCTGTGAAAAGCCCTGTGACAATTTGTGGTGATATCCATGGGCAGTTTCACGATCTTGCTGAACTATTTCGAATTGGAGGGAAGTGTCCAGATACCAACTACTTATTTATGGGCGATTATGTGGACCGTGGTTATTATTCAGTTGAGACTGTGACACTCCTTGTGGCACTGAAAGTACGGTATCCTCAGCGAATTACTATTCTTAGAGGAAACCATGAAAGCCGTCAGATTACTCAAGTATATGGATTTTACGATGAATGCCTAAGAAAATATGGGAGTGCTAATGTCTGGAAGATCTTTACAGACCTCTTTGATTTTTTTCCATTGACCGCATTGGTTGAATCAGAAATATTTTGTTTGCATGGTGGACTGTCACCTTCAATTGAGACCCTTGATAACATTAGGAACTTCGATCGTGTTCAAGAAGTTCCTCACGAAGGACCTATGTGTGATCTACTGTGGTCTGACCCAGATGACAGATGTGGTTGGGGCATTTCTCCTCGTGGTGCTGGATATACCTTTGGCCAGGATATATCTGAACAATTTAATCACACGAACAGCCTTAAATTGATTGCTAGAGCTCACCAGCTTGTTATGGATGGATTTAACTGGGCTCATGTAATTGCCCTTTTCATGGAATGA 783 0.424 MGAIADPTHDLNDQISQLMQCKPLSEQQVKELCEKAKEILMHESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHVIALFME 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04165 260 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 4 254 - -
Tsu07g04165 260 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 4 254 - -
Tsu07g04165 260 CDD MPP_PP2A_PP4_PP6 10 253 - -
Tsu07g04165 260 SUPERFAMILY Metallo-dependent phosphatases 9 253 IPR029052 -
Tsu07g04165 260 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
Tsu07g04165 260 Gene3D - 5 259 IPR029052 -
Tsu07g04165 260 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Tsu07g04165 260 PRINTS Serine/threonine phosphatase family signature 178 205 IPR006186 GO:0016787
Tsu07g04165 260 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Tsu07g04165 260 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Tsu07g04165 260 PRINTS Serine/threonine phosphatase family signature 149 175 IPR006186 GO:0016787
Tsu07g04165 260 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Tsu07g04165 260 SMART pp2a_7 24 259 IPR006186 GO:0016787
Tsu07g04165 260 Pfam Calcineurin-like phosphoesterase 52 243 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04165 Tsu-Chr7 47349643 47355429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04165 12 240 Calmodulin-binding Proteins AT5G63870 32.632 5.29e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04165 K04382 - gmx:100775812 506.908