Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04132 ATGGTGAAGGGACGCCAAGGAGAGCGTGTCAGGCTCTATGTGAGGGGTACAATCCTTGGATACAAAAGaTCCAAATCAAACCAGTACCCAAACACATCGTTGGTGCAGATTGAAGGAGTGAACACCAAGGAAGAGGTAGCTTGGTTACAAGGCCTCACGGTAACAGTGGTGTTGTTCGGGCAAAATTCACGTCAAATCTTCCTCCCAAATCAATGGGATCTCGTGTAA 228 0.4737 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTKEEVAWLQGLTVTVVLFGQNSRQIFLPNQWDLV 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04132 75 SUPERFAMILY Translation proteins 12 57 IPR009000 -
Tsu07g04132 75 Pfam Ribosomal protein L35Ae 12 63 IPR001780 GO:0003735|GO:0005840|GO:0006412
Tsu07g04132 75 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 55 - -
Tsu07g04132 75 Gene3D translation elongation factor selb, chain A, domain 4 2 72 IPR038661 -
Tsu07g04132 75 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 55 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04132 Tsu-Chr7 47122536 47124110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04132 1 51 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 90.196 9.30e-29 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04132 K02917 - dcr:108196770 103.605