Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04119 ATGGGTAACAACTGTGTTGGATCCAGAAAACCCTCTAAAGATGATCAAATTTTTCCGTCTCTTTTTCCAGCTTCTTTTTGGTGGTCATCATGGTCACACCCACCAGCTATTCACAATATTGACAACAAAGAAATCAAGCAAATTAGTATATCAAATGATTTAGAATCAGTTATTATGCAGTTCAAGGAACCAACTAAACCTGctacaaaaccaaaatcaagagcGAAACCGATGATGTTGCCTAATATTAAGAGGGTAGGAGCAAAAACAAAAAGTGCTGGACTTCAAGCAGAATCGGTTTTGCTGACGAATTCGGGTCCTTTTAGGCAATATTATAAGTTGGGAGATGAACTTGGGAAAGGACAATATGGAATTACTTCACTTTGTTTCGAGAAAGCAACGGGGAAAAAGTATGCGTGCAAGACAATCCCGAAGGTAAAATTGGTGAGAGATGATGATCTAGAGGATGTGAGGAGGGAGATTAAGATAATGCATCATTTAGTTGGGAGTCCTAATGTGATAAATATTAAAGGAGCTTATGAGGATCCTATTGTTGTTTATATTGTCATGGAATTATGTGAAGGGGGTGAATTGTTTGATAGGATTGTGGAAAGGGGTCATTACACCGAAAGAAAAGCAGCTAAACTTGCTAGGACTATTGTTAGTGTTGTTGAGGCATGTCACTCACTTGGTGTAATACATCGCGATCTTAAGCCtgagaattttctttttgttgatgGATGTGAAGACTCTACTCTTAAGGCAATTGATTTTGGAATGTCTGTTTTCTTCAAACCAGGAGAAAAGTTTAGTGATGTGGTAGGAAGTGGTTATTACATTGCACCTGAAGTTCTAGGCAAGTGTTATGGTCAAGAAGCTGATGTTTGGAGTGCAGGTGTGATCATATACATTCTCTTATGTGGAGCAGCTCCCTTTTATGGCGAATCGGAACAAGAGATATTTCACGAGATTTTGCACAGTGAACTTGATTTCTCTTCGGATCCTTGGCCAAGTATTTCTGAAAGTGCAAAAGACTTGGTTAAGAAGATGCTTGTTAGAGATCCTAGTAAAAGGATAACAGCGCATGAAGTTCTTTGTCACCCTTGGATTCAGGTTGATGGAGTTGCCCCAGACAAGCCTCTTGATTCTGCAGTTTTAAGTCGTTTAAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCGGAGAATCTCTCTGAAGAAGAAATTTATGGATTGAAAGAATTGTTTAAGATGATAGACACAGACAACAGTGGCCAAATTACTTTCGAAAAACTCAAGGCTGGACTGAAAATGTTCGGTGCCAATCTCGGTGAATCCGAAATATTTGATCTATTACAAGCTGCAGATGTTGATAATAGTGGCACAATTGACTATGGAGAATTCATAGCAGCTACATTGCATTTAAACAAAGTTTCCAAAGAAGATAATTTAGCTGCagctttttcttattttgataAAGATGGAAGTGGCTACATCACTCAAAATGAGCTTCAACAAGTTTGTAAAGAATTTGGTATGGAGGATGTCCACTTAGAAGAAATGATCAGAGAAGTTGATCAAAATAATGATGGACAAATAGACTACAATGAATTTGTAGCTATGATGCAGAGAGGCAATGCAGATTTAGTCAAGTACATTATTCAAGAACAGAATTTTTTAAGCAAAATGGAATCTGGAAATGAAGTTGCTATGGAGGAAGAGAAACGTGTTATTGGAGTGACATCTAAggaaaatataaacaaagaagATGCAAATATTTGTGGTGCAGAAATTCAAAATGAGAATGAAGAATCTAAGGTTGAAAGTCACATTTCTACTACTGacaatgttgaagttgaagcctctaaaaattcaaaacttgCTAAGGAAACAAAGAGCAGAGAAAGTGTTGCTTCCAAGAACAACAAATTTGTCAAAGATAAATCCAAATTGAAAGGCACAACTTCAATATCTAGAAAACAAAGGTCAAAACTTTCTCAGAGTTTATCTTTCCCAGCCAAATCAGCTAGGGAAGATTCTATGCATAAAAGCATTGATGGGTGTCTTGTGAAGACAAAAGCTAAACATGGTCATGCCTCAACTCTTCATCGTTCAAGCAAGTCCGCAAACTTTGAAGGGAAATCAAATGAGGCGAAAACTAACACCGAAGGTTGTAAAAAGAGGACTACTTTGATACCAATGCCTGGTTTGAAACACTCTGTGTTTGGAAGGTCTACTTCAGTTGTCGGAGTCACCAAAAGTCACACATCTGAGGCATCTATACCTGCTGATCAGATATCAAACTCACCAAAAACTGCAAAACCAAGTAAAGAAGATGACGATTCTCACTCGACAACTTCAAGTGCTGCTCTTCGTCAGAGAAACATATGTTCTGGATTTTCATCAAGATTGGAAGAAAGAGCTGAAAAGAGAAAGGAGTTTTTCTCAAAGATAGAGGAAAAAGTTCAAGCCAAGGAAGCAGAAAAAACCAACCAACAAGTTAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGCAATTGAGGAAGAGCTTGACTTTCAAAGCCACTCCAATGCCAAGTTTCTATAAGGAACCACCTCCAAAAGTTGAACTCAAGAAGATACCAACAACCCGACCAAGATCTCCAAAGCTTGGAAGACACAAAGAGTCTTGCACAAGTCCACGTGGGAATCAACAGCACAATGACTCAACCAAGGGAAAGACCATAATAAAGGGTCATAAAGAGGTGATTTCaaagaaacaaatgagaaaaacaCAAGCCAAGGTGAAGTGTCAGGAAAATGCAACCAAAGGAAGCAATGAAGAAGAATGCCAAAATCCACATGTAAACAATTCTGAATTCAAAGATGACATTGAGCAACAATCTGAGACAGATCATCCTGAAAATGATTATGCACAAGCTTTAGATTCTACTACTACACTTGAGTTTCCATCATGTGAGGTTACTGTTGGAGTGTAG 2997 0.366 MGNNCVGSRKPSKDDQIFPSLFPASFWWSSWSHPPAIHNIDNKEIKQISISNDLESVIMQFKEPTKPATKPKSRAKPMMLPNIKRVGAKTKSAGLQAESVLLTNSGPFRQYYKLGDELGKGQYGITSLCFEKATGKKYACKTIPKVKLVRDDDLEDVRREIKIMHHLVGSPNVINIKGAYEDPIVVYIVMELCEGGELFDRIVERGHYTERKAAKLARTIVSVVEACHSLGVIHRDLKPENFLFVDGCEDSTLKAIDFGMSVFFKPGEKFSDVVGSGYYIAPEVLGKCYGQEADVWSAGVIIYILLCGAAPFYGESEQEIFHEILHSELDFSSDPWPSISESAKDLVKKMLVRDPSKRITAHEVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAENLSEEEIYGLKELFKMIDTDNSGQITFEKLKAGLKMFGANLGESEIFDLLQAADVDNSGTIDYGEFIAATLHLNKVSKEDNLAAAFSYFDKDGSGYITQNELQQVCKEFGMEDVHLEEMIREVDQNNDGQIDYNEFVAMMQRGNADLVKYIIQEQNFLSKMESGNEVAMEEEKRVIGVTSKENINKEDANICGAEIQNENEESKVESHISTTDNVEVEASKNSKLAKETKSRESVASKNNKFVKDKSKLKGTTSISRKQRSKLSQSLSFPAKSAREDSMHKSIDGCLVKTKAKHGHASTLHRSSKSANFEGKSNEAKTNTEGCKKRTTLIPMPGLKHSVFGRSTSVVGVTKSHTSEASIPADQISNSPKTAKPSKEDDDSHSTTSSAALRQRNICSGFSSRLEERAEKRKEFFSKIEEKVQAKEAEKTNQQVKSKENQEAEIKQLRKSLTFKATPMPSFYKEPPPKVELKKIPTTRPRSPKLGRHKESCTSPRGNQQHNDSTKGKTIIKGHKEVISKKQMRKTQAKVKCQENATKGSNEEECQNPHVNNSEFKDDIEQQSETDHPENDYAQALDSTTTLEFPSCEVTVGV 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04119 998 Gene3D Transferase(Phosphotransferase) domain 1 189 380 - -
Tsu07g04119 998 MobiDBLite consensus disorder prediction 897 911 - -
Tsu07g04119 998 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Tsu07g04119 998 SMART efh_1 453 481 IPR002048 GO:0005509
Tsu07g04119 998 SMART efh_1 523 551 IPR002048 GO:0005509
Tsu07g04119 998 SMART efh_1 489 517 IPR002048 GO:0005509
Tsu07g04119 998 SMART efh_1 417 445 IPR002048 GO:0005509
Tsu07g04119 998 Gene3D Phosphorylase Kinase; domain 1 102 188 - -
Tsu07g04119 998 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Tsu07g04119 998 Pfam Protein kinase domain 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04119 998 MobiDBLite consensus disorder prediction 628 660 - -
Tsu07g04119 998 MobiDBLite consensus disorder prediction 954 976 - -
Tsu07g04119 998 ProSiteProfiles EF-hand calcium-binding domain profile. 418 448 IPR002048 GO:0005509
Tsu07g04119 998 MobiDBLite consensus disorder prediction 709 724 - -
Tsu07g04119 998 Pfam EF-hand domain pair 489 549 IPR002048 GO:0005509
Tsu07g04119 998 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Tsu07g04119 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Tsu07g04119 998 MobiDBLite consensus disorder prediction 759 778 - -
Tsu07g04119 998 ProSitePatterns EF-hand calcium-binding domain. 532 544 IPR018247 -
Tsu07g04119 998 ProSiteProfiles Protein kinase domain profile. 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04119 998 MobiDBLite consensus disorder prediction 934 953 - -
Tsu07g04119 998 MobiDBLite consensus disorder prediction 912 928 - -
Tsu07g04119 998 MobiDBLite consensus disorder prediction 607 684 - -
Tsu07g04119 998 ProSiteProfiles EF-hand calcium-binding domain profile. 523 554 IPR002048 GO:0005509
Tsu07g04119 998 Gene3D - 381 553 - -
Tsu07g04119 998 Coils Coil 823 853 - -
Tsu07g04119 998 MobiDBLite consensus disorder prediction 759 800 - -
Tsu07g04119 998 MobiDBLite consensus disorder prediction 863 988 - -
Tsu07g04119 998 Pfam Targeting protein for Xklp2 (TPX2) domain 809 875 IPR027329 -
Tsu07g04119 998 MobiDBLite consensus disorder prediction 702 730 - -
Tsu07g04119 998 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Tsu07g04119 998 ProSiteProfiles EF-hand calcium-binding domain profile. 485 520 IPR002048 GO:0005509
Tsu07g04119 998 MobiDBLite consensus disorder prediction 662 680 - -
Tsu07g04119 998 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 38 556 - -
Tsu07g04119 998 MobiDBLite consensus disorder prediction 872 896 - -
Tsu07g04119 998 SMART serkin_6 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04119 998 CDD STKc_CAMK 112 369 - -
Tsu07g04119 998 SUPERFAMILY Protein kinase-like (PK-like) 111 371 IPR011009 -
Tsu07g04119 998 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 556 - -
Tsu07g04119 998 Pfam EF-hand domain pair 430 480 IPR002048 GO:0005509
Tsu07g04119 998 CDD EFh 490 549 IPR002048 GO:0005509
Tsu07g04119 998 SUPERFAMILY EF-hand 409 550 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04119 Tsu-Chr7 47026751 47036984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04119 63 552 EF-hand Containing Proteins AT3G10660 71.862 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g04119 Pkinase 1.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04119 K13412 - gmx:100814475 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04119 07 47026751 47036984 Tsu01g02052 01 21014216 21017301 PCT