Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04099 atgAACTACAACCACCTCACAACACTTCTCATCTTCCTCTTCCTTCTCTCACCATCTCTAATCCTTACAACAACTCACCCAACCGACCTTAAAATCCTCAATGACTTCAAAAACAACCTAGACAACCCCGAACTCTTACAATGGCCTAAAAACAACAACGACCCATGTGGTCCCCCTTCATGGAAATTCATCTTCTGCGACGGTGACAGAGTCACACAAATTCAAACTAAAAACTTAAACCTTTCTGGTACTTTACCTCAAAATCTAAACCAACTCACTCAACTCTTCAACTTGGGTCTTCAAAACAACAAACTCCACGGTTCATTACCGTCGCTAAAAGGGTTATCAAATCTCAAATATGCTTATCTTGATAACAATGAATTTGACACTATCCCTTTTGATTTCTTTCAAGGTTTATCTAGTTTAGAGATTCTTGCATTAGATAACAATAATCTCAATGTTACTTCAAATGGGTGGCAATTTCCTTCTTCTTTGATGGATTCACCTCAGCTGACAACGTTATCATGTATGAGCTGTAATTTGGCTGGTGTTTTACCGGATTTTCTTGGAAAAATGAACTCTTTATCTTATTTGAAACTTTCCGGTAATAGTTTATCCGGCGAGATTCCGGTGAGTTTGAATGGTTCTGGTTTACAGACTTTGTGGTTGAATAATCAAAAGGGTGAGTTACTATCTGGGAATATTGATGTTGTTGCTACTATGGTTTCTCTTACTAGTTTATGGCTTCATGGAAACAGGTTCAGTGGTTCGATTCCGGAGAATATCGGTGATTTGGTTTCTTTAAAAGATCTTAATCTTAATGGTAATGAACTTGTTGGAATTGTTCCTAAGTCTTTAGGTGATTTGGAATTGGATAATCTTGATTTGAATAATAATCGGTTTATGGGTCCAATTCCGAGTTTTAAAGCTTCTAAAGTTTCTTATAGtaataatgatttttgtttgaatCAAACTGGTGTTTCTTGTTCTTTTGAAGTTATGGCTCTTTTGGGTTTTCTTGGTGGGTTGAATTATCCTTCGAATTTAGTTGATTCATGGATTGGGAATAATCCTTGTGAGAGTTGGTTGGGAATAAAATGTAATACTGATGGTAAAGTTTCTATGATTAATATGCAGCATTTTAATCTTAATGGTACTTTAAGTCCTTCTGTTGCAAATTTAGGTTCTTTAGCTGAAATCAGATTGGGGGGTAATAATCTCAATGGTGTAGTGCCGAGTAATTGGACTGGATTGATGAAGTTGAATTTGTTGGATCTGACTGACAATAATATTTCACCTCCTATGCCGGTTTTTAGTAATGGATTGAAACCTATGGTTGATGGGAATTCTCTGTTGAATGGTGGTGGCAGCTCGGGCAGTCCTTCGTCGGGGAAAAACAGTACATCGGGTGGATCTGGGGATATTGGTGGAGATATACACAGATACTCGAATTCAAGTTCAACTGATGCGGTCGAAACGAAAAAATCCAAAAGGAAAGGGTTGGTTTTGATTGTTGCTCCCATTGCTGGTGTGGCGTTTGCTGCTTTTCTGTTGATACCGCTTTACGTGTATTGTTTCAGAAGGACAAAGGATGGTTTCCAGGCTCCAAGTTCACTCGTAGTTCACCCTAGAGATCCATCTGATTCGGACAGTACCGTAAAGATAGCTATTGCTAATAATGGCAATGGAAGTGTTTCCACTTTGGCAGGGAGTGGAAATGGGAGTAGAAACAGCAGTGCAATTGGCGATTCTCATGTCATTGAAGCTGGAAATCTTGTCATATCCGTTCAAGTTCTAAGAAACGTGACAAAGAATTTCGCCCCTGAGAACGAGCTCGGCCGCGGTGGATTCGGAGTTGTTTATAAGGGAGAGTTGGATGATGGGACTAAGATTGCGGTAAAAAGAATGGAAGCCGGTGTGATCACAAATAAAGCCTTGGATGAATTTCAGGCTGAAATTGCAGTTCTGTCGAAAGTTCGACATCGGCATCTAGTGGCCCTTATTGGTTATTCCACTGAAGGTAATGAGAGGATTCTAGTGTATGAGTATATGCCACAAGGTGCTCTCAGTCAGCATCTTTTCCATTGGAAGAGCTTTGGACTCGAGCCTCTCTCTTGGAAGAGGAGGCTCAATATTGCATTGGATGTTGCTAGAGGAATGGAGTATCTTCATACTCTTGCTCACCAGAGCTTCATTCATAGAGATCTTAAGTCCTCAAATATTTTGCTTGCTGATGATTTTAGAGCAAAAGTTTCAGATTTTGGATTGGTAAAACTCGCTCCTAATGGCGAAAAATCTGTAGTGACCAAACTTGCTGGAACCTTTGGATACTTGGCTCCAGAATATGCagTGACAGGAAAAATCACTACCAAAGTAGATGTTTTCAGTTTTGGTGTTGTGCTAATGGAGCTGTTGTCTGGATTGATGGCACTTGATGAGAGTAGACCTGAGGAAAGCCAATACTTGGCGGCATGGTTCTGGAATATAAAATCAGATAAGAAGAGACTAATGGCTGCTATTGACCCAACCCTTGACATAAACGAAGAAACATTCGAAAGCGTCGCAATTATTGCTGAGCTAGCCGGACACTGCACGGCTAGAGAACCAAACCAAAGGCCAGAAATGGGTCATGCTGTCAACGTTCTTGCACCACTTGTTGAAAAATGGAAACCATTCGACGATGACCCTGACGAGTATTCCGGCATCGATTATAGTCTTCCCCTTAATCAGATGGTGAAAGGATGGCAAGAGGCGGAAGGAAAGGACACAAGTTATATGGACCTAGAAGACAGTAAGAGTAGTATCCCCGCAAGACCTACTGGATTTGCAGATTCTTTTACTTCGGCTGATGGCCGGTGA 2859 0.4033 MNYNHLTTLLIFLFLLSPSLILTTTHPTDLKILNDFKNNLDNPELLQWPKNNNDPCGPPSWKFIFCDGDRVTQIQTKNLNLSGTLPQNLNQLTQLFNLGLQNNKLHGSLPSLKGLSNLKYAYLDNNEFDTIPFDFFQGLSSLEILALDNNNLNVTSNGWQFPSSLMDSPQLTTLSCMSCNLAGVLPDFLGKMNSLSYLKLSGNSLSGEIPVSLNGSGLQTLWLNNQKGELLSGNIDVVATMVSLTSLWLHGNRFSGSIPENIGDLVSLKDLNLNGNELVGIVPKSLGDLELDNLDLNNNRFMGPIPSFKASKVSYSNNDFCLNQTGVSCSFEVMALLGFLGGLNYPSNLVDSWIGNNPCESWLGIKCNTDGKVSMINMQHFNLNGTLSPSVANLGSLAEIRLGGNNLNGVVPSNWTGLMKLNLLDLTDNNISPPMPVFSNGLKPMVDGNSLLNGGGSSGSPSSGKNSTSGGSGDIGGDIHRYSNSSSTDAVETKKSKRKGLVLIVAPIAGVAFAAFLLIPLYVYCFRRTKDGFQAPSSLVVHPRDPSDSDSTVKIAIANNGNGSVSTLAGSGNGSRNSSAIGDSHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVITNKALDEFQAEIAVLSKVRHRHLVALIGYSTEGNERILVYEYMPQGALSQHLFHWKSFGLEPLSWKRRLNIALDVARGMEYLHTLAHQSFIHRDLKSSNILLADDFRAKVSDFGLVKLAPNGEKSVVTKLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLSGLMALDESRPEESQYLAAWFWNIKSDKKRLMAAIDPTLDINEETFESVAIIAELAGHCTAREPNQRPEMGHAVNVLAPLVEKWKPFDDDPDEYSGIDYSLPLNQMVKGWQEAEGKDTSYMDLEDSKSSIPARPTGFADSFTSADGR 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04099 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Tsu07g04099 952 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Tsu07g04099 952 Pfam Leucine rich repeat 243 301 IPR001611 GO:0005515
Tsu07g04099 952 Pfam Protein tyrosine and serine/threonine kinase 609 880 IPR001245 GO:0004672|GO:0006468
Tsu07g04099 952 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 7 952 - -
Tsu07g04099 952 Pfam Leucine rich repeat N-terminal domain 334 368 IPR013210 -
Tsu07g04099 952 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Tsu07g04099 952 CDD STKc_IRAK 612 885 - -
Tsu07g04099 952 SMART serkin_6 606 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04099 952 Gene3D Ribonuclease Inhibitor 27 328 IPR032675 -
Tsu07g04099 952 Gene3D Phosphorylase Kinase; domain 1 570 683 - -
Tsu07g04099 952 SUPERFAMILY Protein kinase-like (PK-like) 584 882 IPR011009 -
Tsu07g04099 952 SMART LRR_typ_2 115 138 IPR003591 -
Tsu07g04099 952 SMART LRR_typ_2 394 417 IPR003591 -
Tsu07g04099 952 SMART LRR_typ_2 192 216 IPR003591 -
Tsu07g04099 952 SMART LRR_typ_2 241 264 IPR003591 -
Tsu07g04099 952 SMART LRR_typ_2 265 288 IPR003591 -
Tsu07g04099 952 SMART LRR_typ_2 139 161 IPR003591 -
Tsu07g04099 952 Gene3D Ribonuclease Inhibitor 331 453 IPR032675 -
Tsu07g04099 952 MobiDBLite consensus disorder prediction 449 491 - -
Tsu07g04099 952 MobiDBLite consensus disorder prediction 451 490 - -
Tsu07g04099 952 SUPERFAMILY L domain-like 332 438 - -
Tsu07g04099 952 Gene3D Transferase(Phosphotransferase) domain 1 684 898 - -
Tsu07g04099 952 SUPERFAMILY L domain-like 25 310 - -
Tsu07g04099 952 MobiDBLite consensus disorder prediction 922 952 - -
Tsu07g04099 952 ProSiteProfiles Protein kinase domain profile. 606 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04099 952 PANTHER OSJNBA0070M12.3 PROTEIN 7 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04099 Tsu-Chr7 46809755 46813913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04099 81 919 Receptor kinase-like Gene Family AT1G55610 29.745 8.93e-85 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tsu07g04099 PK_Tyr_Ser-Thr 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04099 - - gmx:100305366 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04099 07 46809755 46813913 Tsu07g04099 07 46809755 46813913 ECH